Ruditapes philippinarum (Manila clam): 132713584
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Entry
132713584 CDS
T09557
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132713584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132713584
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132713584
03012 Translation factors [BR:
rphi03012
]
132713584
04131 Membrane trafficking [BR:
rphi04131
]
132713584
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132713584
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132713584
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
132713584
Translation factors [BR:
rphi03012
]
Eukaryotic type
Elongation factors
132713584
Membrane trafficking [BR:
rphi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
132713584
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132713584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
132713584
NCBI-ProteinID:
XP_060552203
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MPPKEFKEKVHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKY
AWVLDKLKAERERGITIDIALWKFTTSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIV
ASSTGEFEAGISKNGQTREHALLAYTLGVKQMIIGVNKIDNTEPPYSEARFNEITKEVSA
YVKKVGYNPKEVAVVPISGWHGDNMIEPSNNMPWYKGWSVEKKEPVTGKIIQSSGKTLLE
ALDSIQSPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVQLTTEVK
SVEMHHEALTEALPGDNVGFNVKNVSIKDIKRGNVCGDSKNDPPKGASSFVAQVIIMNHP
GEIHHGYAPVLDCHTAHIACKFEEIKEKIDRRSGKVLEENPKMVKSGDACMVKLVPSKPM
VVESFSEYPPLGRFAVRDMRQTVAVGVIKSVQKSEMQGKTTKAAQKATGKKK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaagagtttaaagagaaggtccacatcaacattgttgtgattggtcatgtg
gactcgggcaagtccacctcaactggtcacctgatctataaatgtggtggtattgataaa
agaaccattgagaaatttgagaaagaggctgctgagatgggcaaaggatctttcaaatat
gcctgggtgttggacaaactgaaggcagaaagagaacgtggtataacgatcgatattgca
ctgtggaaatttactacatcgaaatactacatcaccataattgacgcaccgggtcatcgt
gatttcatcaaaaacatgatcacaggaacttcacaagctgactgcgctgtattgattgtc
gcctccagtactggagagtttgaagcgggaatctcaaagaacggtcaaacaagagagcac
gccctgttggcttacacccttggtgtgaaacaaatgataattggtgtaaataagattgac
aacacggaaccaccgtactctgaggcgagattcaatgaaataacaaaagaagttagtgca
tacgtgaaaaaggttggttataatccgaaggaagtagcagttgtacctatttccggttgg
cacggtgataacatgattgaaccatctaacaacatgccctggtacaaaggatggtctgtt
gagaagaaggagcctgtcactggaaaaattattcagtcgtcgggaaagaccctccttgag
gcattggattctatccagtctccggctcgaccaacagataaaccattacgacttcctctt
caagatgtgtacaagatcggaggaataggaactgttccggttgggcgtgttgaaacggga
gttatcaaacctggcatggtggtaacctttgctcctgtacaacttaccactgaggtcaag
tcggttgaaatgcaccatgaagccttgaccgaggctctgccaggtgacaacgtggggttt
aatgtaaagaatgtatctattaaagatataaagagaggaaatgtttgcggtgattcaaag
aatgatcccccaaaaggagcgagtagttttgttgcacaggtgatcatcatgaaccaccca
ggagagattcatcatggatatgccccggttttagattgtcacacggcacacattgcctgc
aagtttgaggaaatcaaggaaaagattgatcgtagatccggcaaggtattggaagagaat
ccaaagatggtcaaatctggtgatgcttgtatggtaaagttggtaccatctaaaccgatg
gtggtcgagagtttctcagaatatcccccactggggaggtttgctgtccgagacatgaga
cagaccgtggcggttggtgtaataaaatcggtgcagaaatctgagatgcaaggaaaaacc
acgaaggcagcacaaaaggcgaccgggaagaagaaatag
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