KEGG   Ruditapes philippinarum (Manila clam): 132713585
Entry
132713585         CDS       T09557                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132713585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132713585
   03016 Transfer RNA biogenesis [BR:rphi03016]
    132713585
   03012 Translation factors [BR:rphi03012]
    132713585
   04131 Membrane trafficking [BR:rphi04131]
    132713585
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rphi04147]
    132713585
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     132713585
Transfer RNA biogenesis [BR:rphi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    132713585
Translation factors [BR:rphi03012]
 Eukaryotic type
  Elongation factors
   132713585
Membrane trafficking [BR:rphi04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    132713585
Exosome [BR:rphi04147]
 Exosomal proteins
  Proteins found in most exosomes
   132713585
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 132713585
NCBI-ProteinID: XP_060552204
LinkDB
Position
Unknown
AA seq 467 aa
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVASST
GEFEAGISKNGQTREHALLAYTLGVKQMIIGVNKIDNTEPPYSESRFKEIEKEVSAYVKK
VGYNPKAVAIVPISGWHGDNMLEPSPNMGWYKGWKIERKGADGKEESLTGKTLFEALDAI
LPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPVQLTTEVKSVEMH
HEALTEALPGDNVGFNVKNVSIKDIKRGNVCGDSKNDPPKGADSFLAQVIIMNHPGEIHN
GYAPVLDCHTAHIACKFAEIKEKIDRRSGKKLEDMPKMVKSGDACMVTLVPSKPMVVESF
AEYAPLGRFAVRDMRQTVAVGVIKSVEKTDKQGKTTKAAQKATGKKK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgggtaaagaaaagatccacatcaacattgttgtgattggtcatgtggactctggcaag
tccacctcgactggtcacctgatctataaatgtggtggtattgataaaagaaccattgag
aaatttgagaaagaggctgctgagatgggcaaaggttcgttcaagtatgcctgggtgttg
gacaaactgaaggcagaaagagaacgtggtatcaccatcgatattgccctgtggaaattt
gagaccactaaatactacgtcaccattattgatgccccaggccatcgtgatttcatcaag
aacatgattacaggaacctcacaagctgactgcgctgtactgattgtcgcctccagtact
ggagagtttgaagcgggaatctccaagaacggtcaaacaagagagcacgccctgttggct
tacacccttggtgtgaaacaaatgataattggagtaaataagattgacaacacagaacca
ccatactctgagagcagattcaaagaaatagagaaagaagtaagtgcgtatgtgaaaaaa
gttggttataatcctaaagcagtagcaattgttcccatttctggttggcacggggacaac
atgttggaaccatcaccaaatatgggatggtacaagggatggaaaatagagaggaagggt
gcagatggaaaggaggagtcactgacggggaagactttgtttgaggcccttgacgccatt
cttcctccaacccgacctacagacaaaccactcagattaccacttcaggatgtctacaag
ataggaggaataggaactgttccggttgggcgtgttgaaactggactgctcaaacctggc
atggtggtaacctttgctcctgtacaactgaccactgaggtcaagtcggttgaaatgcac
catgaagccttgaccgaggctctgccaggtgacaacgtgggatttaacgtaaagaatgta
tctatcaaggacattaagagaggaaatgtttgcggggattcaaagaatgatccaccaaaa
ggagcagacagttttctggcacaggtcatcatcatgaaccacccaggagagattcataat
ggatatgccccggttttagattgtcacacggcacacatagcctgcaagtttgcagaaatc
aaggaaaagattgatcgtagatctggcaagaagttagaggatatgccaaagatggtcaaa
tctggtgacgcatgtatggtgactttagtaccatctaaaccaatggtggtcgagtccttt
gccgagtatgccccactggggaggttcgctgtccgagacatgagacaaacggtggctgtt
ggcgtaataaaatcggtggagaaaactgacaagcaaggaaaaaccacgaaggcagcacaa
aaagcaactggaaagaagaaatga

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