Ruditapes philippinarum (Manila clam): 132713585
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Entry
132713585 CDS
T09557
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132713585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132713585
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132713585
03012 Translation factors [BR:
rphi03012
]
132713585
04131 Membrane trafficking [BR:
rphi04131
]
132713585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132713585
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132713585
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
132713585
Translation factors [BR:
rphi03012
]
Eukaryotic type
Elongation factors
132713585
Membrane trafficking [BR:
rphi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
132713585
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132713585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
132713585
NCBI-ProteinID:
XP_060552204
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVASST
GEFEAGISKNGQTREHALLAYTLGVKQMIIGVNKIDNTEPPYSESRFKEIEKEVSAYVKK
VGYNPKAVAIVPISGWHGDNMLEPSPNMGWYKGWKIERKGADGKEESLTGKTLFEALDAI
LPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPVQLTTEVKSVEMH
HEALTEALPGDNVGFNVKNVSIKDIKRGNVCGDSKNDPPKGADSFLAQVIIMNHPGEIHN
GYAPVLDCHTAHIACKFAEIKEKIDRRSGKKLEDMPKMVKSGDACMVTLVPSKPMVVESF
AEYAPLGRFAVRDMRQTVAVGVIKSVEKTDKQGKTTKAAQKATGKKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaagatccacatcaacattgttgtgattggtcatgtggactctggcaag
tccacctcgactggtcacctgatctataaatgtggtggtattgataaaagaaccattgag
aaatttgagaaagaggctgctgagatgggcaaaggttcgttcaagtatgcctgggtgttg
gacaaactgaaggcagaaagagaacgtggtatcaccatcgatattgccctgtggaaattt
gagaccactaaatactacgtcaccattattgatgccccaggccatcgtgatttcatcaag
aacatgattacaggaacctcacaagctgactgcgctgtactgattgtcgcctccagtact
ggagagtttgaagcgggaatctccaagaacggtcaaacaagagagcacgccctgttggct
tacacccttggtgtgaaacaaatgataattggagtaaataagattgacaacacagaacca
ccatactctgagagcagattcaaagaaatagagaaagaagtaagtgcgtatgtgaaaaaa
gttggttataatcctaaagcagtagcaattgttcccatttctggttggcacggggacaac
atgttggaaccatcaccaaatatgggatggtacaagggatggaaaatagagaggaagggt
gcagatggaaaggaggagtcactgacggggaagactttgtttgaggcccttgacgccatt
cttcctccaacccgacctacagacaaaccactcagattaccacttcaggatgtctacaag
ataggaggaataggaactgttccggttgggcgtgttgaaactggactgctcaaacctggc
atggtggtaacctttgctcctgtacaactgaccactgaggtcaagtcggttgaaatgcac
catgaagccttgaccgaggctctgccaggtgacaacgtgggatttaacgtaaagaatgta
tctatcaaggacattaagagaggaaatgtttgcggggattcaaagaatgatccaccaaaa
ggagcagacagttttctggcacaggtcatcatcatgaaccacccaggagagattcataat
ggatatgccccggttttagattgtcacacggcacacatagcctgcaagtttgcagaaatc
aaggaaaagattgatcgtagatctggcaagaagttagaggatatgccaaagatggtcaaa
tctggtgacgcatgtatggtgactttagtaccatctaaaccaatggtggtcgagtccttt
gccgagtatgccccactggggaggttcgctgtccgagacatgagacaaacggtggctgtt
ggcgtaataaaatcggtggagaaaactgacaagcaaggaaaaaccacgaaggcagcacaa
aaagcaactggaaagaagaaatga
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