Ruditapes philippinarum (Manila clam): 132713735
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Entry
132713735 CDS
T09557
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132713735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132713735
03036 Chromosome and associated proteins [BR:
rphi03036
]
132713735
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132713735
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132713735
PBAF complex
132713735
GBAF(ncBAF) complex
132713735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
zf-BED
Motif
Other DBs
NCBI-GeneID:
132713735
NCBI-ProteinID:
XP_060552395
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MKAKDPVWNHYDLIEGDDSIQKAKCKDCGSIVSAKSARLRIHRAKCCGQTPQSDGTFDSV
GSPHHEPPPLPLPMMNRTYYDMMSPAASFPGPPRPGYSPGPGHPTAGPPMTGGMPPRMGM
PHGPGMSPHPYGGQSSKTKDSGMPRPGMGPGMPPPQMGMGTPMDRKRQSDSRAAQHMKAK
KKKKMADKILPQRVRDLVPESQAYMDLLAFERKLDATITRKRLDIQEALKRPMKQKRKLR
IFISNTFYPAKPAEGEEGEESVPSWELRVEGRLLEDAASAKLSDANKTKRKFSSFFKSLV
IELDKELYGPDNHLVEWHRTQNTQETDGFQVKRPGDQNVRCTVLLMLDYQPAQFKLDPRL
ARLLGVHTQTRPVIINALWQYIKTHRLQDPHEREYINCDRYLEQIFECKRMKFAEIPGKL
HSLLMPPDPIVINHVITVEGPDSRKTACYDIDVEVDDTLKQQMNSFLLSTQSQNEIANLD
SKIYEIVETINRGVDLSLIVCEFCQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaggatcctgtttggaatcattatgatttgatagaaggggatgattctata
cagaaagctaaatgtaaagattgtgggagtatcgtaagtgctaagagtgcgcggctgcgg
atacatagagctaaatgttgcgggcagacccctcagtctgatggtacgtttgacagtgtt
ggttcacctcatcatgaaccacctccattacccctaccaatgatgaacagaacttattat
gacatgatgagtccagctgctagttttccgggtccaccaaggccgggttacagtcctgga
ccaggtcacccaactgctggtcccccaatgacaggaggaatgccacctcgcatgggtatg
ccacatggacctgggatgtctccgcacccatatggaggccagtcatcaaaaaccaaggat
tctggtatgcctcggcctggtatgggaccagggatgcccccgccccagatgggtatggga
acaccgatggataggaaaagacagagtgattccagagctgcccaacatatgaaagcgaaa
aagaagaaaaaaatggcagacaaaatattgccccaaagggtgagggatctggtacccgaa
tctcaagcatacatggatttgctggcctttgaacgtaaacttgatgccaccatcacaaga
aaacgacttgatattcaggaggccctgaaaagaccaatgaagcaaaagagaaagttacgt
atcttcatatcaaacacattctatccggctaaacctgccgagggtgaggaaggcgaggaa
tctgtcccctcgtgggagcttagagtcgagggcagacttcttgaagatgctgccagtgcc
aagcttagtgatgcaaataaaacaaagagaaaattttcatcgttctttaagagccttgtt
attgaattagacaaggagctgtatggacctgacaaccatcttgttgagtggcatcgtacg
cagaacacccaggagacggatggttttcaggtgaaaagaccgggcgaccagaatgtacga
tgtaccgttcttctgatgctggattatcagccggcacagtttaagcttgatcctcgttta
gcccggcttcttggggttcacacacagacaagaccagtgatcatcaatgccctctggcag
tatatcaagacacacaggttgcaggatccccatgagagggaatacatcaactgtgacaga
tacctagagcagatatttgagtgcaagcgtatgaagtttgcagagattccaggaaaactt
cactctttgttgatgccaccagatcctattgtcataaatcatgtaatcacagtagaggga
ccggactcgagaaaaactgcatgttacgatatagatgttgaagtggatgacacattgaaa
caacagatgaactcgttcctgttgtcaacacagagccagaatgagattgctaacttagat
agcaagatttatgaaattgttgaaactattaatcgaggtgtagatttatcgttaattgtt
tgtgagttttgccaatga
DBGET
integrated database retrieval system
