KEGG   Ruditapes philippinarum (Manila clam): 132713865
Entry
132713865         CDS       T09557                                 
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
  KO
K11274  chromosome transmission fidelity protein 4
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rphi03036]
    132713865
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    132713865
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 HMG_WDHD1 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th HMG_box NBCH_WD40 KNTC1_N WD40_MABP1-WDR62_1st HMG_box_2 Beta-prop_SCAP DUF6476
Other DBs
NCBI-GeneID: 132713865
NCBI-ProteinID: XP_060552551
LinkDB
Position
Unknown
AA seq 1063 aa
MPAAKSMRYAHSDGFTDVCYEESGRYILTCGSDGDVRIWDGIEDDDAISHRCGDKSFAIA
IKGNRYFAATDTNTIQAYTFPDGTPDGILTRFTAPANHIVLNKSGSTLVAGASDFTIKIV
DVSNCSYKTCQGHEAPVLSVAIDPKEEFLVSSSCDGTVRLWKMSDRSQIQSFSLLPKCSD
ASLSKTMCRMCWEPENGKILFIPVQKEIHMYERETWKKLSTLTDSSFTEHVSVLAVSPDG
KYLAAGGSDGWICVFNLQSKKCVDKHKNEKGLSIMSLAWNPKGNMELVFCDNQGQLGQLS
EISITEKEKDDEGSSKVASGVFDDEDDDFLIQATNDDDTMASDDDMTGVTSKPTQPLFSD
DDGDSIPDFKKADDDASSITSEKSEIPKPEVRIEGFKPTPLQRPFQPGSTPEHLSSRFMV
WNSVGVVKQYNSDDENSIDIEFHDTSIHHAMHIMNNFNYTMSDLSTEAVVLATEGDSDAA
SKLTCMHFSSWDNNKEWSISMPDEEEIQCVTLGEGWLAAATELRNLRLFSVAGVQKEIFT
LPGPVVCMSGHQNQLMIVYHRGMGIPGEQCLGVSLLDVREWKREIHGEPLPLSSKSTLAW
AGFSAEGTPFYMDSTGIVRMLCRNMGKTWVQVANTRTNAKGKSDHYWIVGIHENPQQLRC
IPCKGSRYPATLPRPAPVILPFQIPLCELATEKSQYEESLWRTNLLSGHFDHWTRQGFEF
DETIKAEALKPAQEALMKLFALSARSEREARALEVCDMMSDQHTLQLAIKYSSRMRYMQL
AQKISELAVRKAEEEEAKQYAQSYEEESRSTPYTSVSRAEQYETEYIEETQEQDVDMEED
ESSSGPMLAIKVKEDKQDKSQNPFKSRSNPFKVSSQQSSSSFTKGTQVFDSMSKKKEKPS
PLFPLDTKSTKSQKKGSQPKLFMKKKSEPVKTNKIEEAASQKPASAFDLWLEENCERLKE
SHQETDEEEFSKYAAEQFRALAKEERQTWVKKAKASSEKSKENSIDTEPKDNSENKKRKR
DDTDSEEGVKKHRDSIETDVKKTPLSQTTNSKLANFAFKKDDS
NT seq 3192 nt   +upstreamnt  +downstreamnt
atgccggccgccaaatcaatgcgttatgcccacagtgacggttttactgacgtttgttac
gaagaatcgggaaggtatatattgacttgtggatctgatggtgatgtgaggatatgggat
ggtatagaagatgatgatgctatctctcacaggtgtggagacaagtcatttgccatagcc
atcaagggaaaccgctactttgcagcaactgatacaaacacaattcaagcatatacattt
cctgatggtactccagatggtattttgacaagatttactgcccctgccaatcacattgtt
ttaaataaaagtggttcaactctagttgctggtgctagtgattttactataaagattgtt
gatgtgagcaattgtagttataaaacctgccagggacatgaagcacctgtactcagtgtg
gctatagatccaaaggaagaattcttggtttcttcaagttgtgatggaactgtccggcta
tggaagatgagtgatcgttcacagatacaatctttctctcttctacctaagtgtagtgat
gcgagtttgtcaaaaacaatgtgtaggatgtgctgggaaccagaaaatgggaaaatactc
ttcataccagttcagaaagagattcatatgtatgagagagaaacatggaagaaactatct
accttgactgactcatcatttactgagcatgtatcagtgctggctgttagtccagatggg
aaatacctagcagcaggagggtctgatggttggatttgtgtgttcaatctacagtccaag
aaatgtgttgataaacataagaatgagaaagggctctctatcatgtctttagcttggaat
ccaaaaggaaatatggaacttgttttctgtgataatcagggtcaacttggacagttaagt
gaaatatctataacagaaaaagaaaaggatgatgaaggtagtagtaaggtagcgagcggt
gtatttgatgatgaagatgatgattttctcatacaagctacaaatgatgatgatacaatg
gctagtgatgatgacatgacaggtgtaacatctaaacctacacaacctctcttctcagat
gatgatggagatagtattcctgacttcaagaaagcagatgatgatgcctcaagtataacc
tctgagaagtctgaaataccaaagccagaagtccgcattgagggattcaaacccactcct
ctacagaggccctttcagcctggctcaacacctgaacatctttctagtaggtttatggtg
tggaactctgtgggagttgtgaaacagtacaactcagatgatgagaattctattgatata
gagttccatgatacatccatacatcatgctatgcatataatgaacaactttaattacact
atgtcagacttgtctactgaggctgttgtcctagcaacagagggggattctgatgctgca
agtaaactcacttgcatgcatttttcatcctgggacaacaataaagaatggagcattagt
atgcccgacgaggaggagattcagtgtgttacacttggtgagggatggcttgcagctgcc
acagaacttagaaacttgcgtctgttctcagtggctggtgtacagaaggagatatttacc
ctgccaggaccagtggtgtgtatgagtggacatcaaaaccagctgatgattgtttaccac
agaggaatgggaatacctggtgaacagtgtcttggtgtttctttgttggatgtaagagaa
tggaagagggaaatccatggagaacctttaccattgtcatctaagtctacattggcatgg
gcagggttctcggctgaaggaacaccattttatatggattctactggaattgtgcgaatg
ctttgtagaaatatgggtaaaacatgggtacaggttgctaacacaaggacaaatgccaaa
ggaaaatcagaccattactggatagttggtatccatgaaaacccccaacagctcaggtgt
ataccatgtaagggctcaagataccctgccactttacccaggccagctcctgtcattttg
cccttccagatacctttatgtgaacttgccacagagaaaagtcaatatgaggagtcatta
tggaggacaaacctactgtcaggacactttgatcattggaccagacaagggtttgagttt
gatgagacaattaaggccgaggcccttaaacctgcacaggaggccctcatgaaactattt
gctctttcagcaagatcagagagggaagctcgagcattggaggtatgcgatatgatgtct
gaccagcatacgttacagttggccatcaaatacagcagtcgtatgcgatacatgcagctg
gcacagaaaatcagtgaactggctgtaaggaaggcagaggaggaggaggctaaacaatat
gctcaaagttatgaggaagaatctaggtcaacaccgtacacaagtgtctctagggcagaa
cagtacgagacagagtatatagaggaaacacaggaacaagatgttgatatggaggaagat
gagagctcatcaggaccgatgttagctatcaaggtcaaagaagacaaacaagacaagtcc
cagaatcccttcaagagcagatctaaccctttcaaggtatcaagtcaacaatctagttca
tcattcaccaagggtacacaggtatttgatagtatgtcaaagaagaaagaaaaaccctca
cctttgtttccactggatacaaaatcaacaaaatcacagaaaaagggatcacagcctaag
ctattcatgaaaaagaaatcggagccggttaaaacaaacaaaattgaagaggcagcttct
caaaaacctgcgtcagcttttgacctatggttggaggagaactgtgaaagattgaaggaa
agccatcaggagactgacgaggaagagttcagtaaatatgctgctgaacaatttagggct
ttagccaaagaggagagacagacttgggtgaagaaagcgaaggcttcaagtgagaagagt
aaagaaaatagtattgatacagaaccgaaagataactctgaaaacaagaagaggaaacgt
gatgatacagattcggaggagggtgtcaaaaaacacagagacagtatagaaactgatgtt
aaaaagacaccattgtctcaaacaactaactctaaacttgcaaattttgcctttaagaaa
gatgatagttaa

DBGET integrated database retrieval system