Ruditapes philippinarum (Manila clam): 132713883
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Entry
132713883 CDS
T09557
Name
(RefSeq) DDB1- and CUL4-associated factor 4-like
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132713883
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132713883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
WD40_like
WD40
Phytochelatin
FlaF_Ig-like
Motif
Other DBs
NCBI-GeneID:
132713883
NCBI-ProteinID:
XP_060552575
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MPRHKRGRRRFIDDDNYSQRQKFQNSGSARSNVQSRRYEDQHGFRGRRRSNFKEDGRGYS
GYSSSSEQQSSSSTNSSCGNELEIPGFYYDAEKKRYFKIAPNHASSTCNYTRDSIAKQQA
EKKRQSDIAEIFQSDIKAVLKQKAYRKCVSHNLTHLIQDRLVMGHTKSFLRSKIFQNSVS
HFKPVGSQNIFDPPLLDHYENLEHMQVMHIGDDHNEILSLWSIRETWVQRIQRIQISESV
RTDKQTSLSVIGKPKLQAILPMLNKVTDLCWAPVSDGQKHVLYTTMCHMGHQESLAQIKS
LNPEDTTASQNYNLGKKATWTCAWNKAKCQFSVGSEKCALVLNVERRTMWEYNTNKSDPL
SLAFSNHSGNKLHVGTRKGQILTFDRRSTSTFPIVTLNHHSSVCSVKEMENDNFLLASDF
TGKICLWDIRMKKILVQYSGNINQYSRLPLHVDELQKIVYTVGEDGYTRFWSLDEGKQLY
TIPPPCSVSRETIPCVKLSSRWGDRDGNTGLIMGLKNKLYFYGTLPLT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccaagacataaacgaggaagaagaaggtttatagatgatgataattattcacagaga
caaaagtttcaaaactcaggctctgctagatctaatgtacaatcaagaagatatgaggac
cagcatggttttagaggaaggagaagatcaaattttaaagaggacggaaggggatattca
ggatacagctcatccagtgaacagcaaagtagttcatccacaaattctagttgtggaaat
gagcttgaaattccagggttttactatgatgcagaaaagaaacggtatttcaagatagct
cccaaccatgcatccagtacctgcaactatacaagagattccattgctaaacaacaagct
gagaaaaaaagacagagtgacatcgctgaaatatttcaaagtgacattaaagcagtatta
aagcaaaaagcatatagaaaatgtgtgtcacataatttgactcatcttattcaagacagg
ctagtgatgggtcatacaaaatcttttttaagatcaaaaatttttcagaacagtgtgtct
cattttaagccggtaggttcacaaaacatttttgatccacctcttttggatcattatgaa
aatttagaacatatgcaggtaatgcatataggtgacgatcataatgaaattctatccttg
tggtctataagagagacttgggttcagaggatacaaagaattcaaatctctgaatcagta
cggactgacaaacaaacatcactgtctgttattggaaagcctaaattacaagcaatttta
ccaatgttgaataaagtgacagatctatgctgggctccagtttcagatggccagaaacat
gttttatacactacaatgtgccatatgggacaccaggaaagtttagctcaaataaaaagt
ttaaacccggaagataccacagcaagtcagaattacaacctaggtaagaaagctacatgg
acctgtgcctggaacaaagcaaaatgtcagttcagtgtaggcagtgaaaagtgtgcttta
gtgctgaatgtagaacgtagaacaatgtgggaatacaatacaaacaaaagtgatccactc
tccctggcattctcaaatcattcagggaacaaactacatgtaggcacacgcaagggtcaa
atattgacatttgacaggagaagtacgtcaacctttccaattgtgactttaaaccatcat
tccagtgtatgtagtgtaaaagaaatggaaaatgacaactttctgcttgcctcagacttc
acaggaaagatttgtttatgggatattagaatgaaaaagattttggtgcaatattcagga
aatataaatcagtattccagacttcctttgcatgttgatgaactgcagaaaatagtttac
acagttggtgaggatggatacactaggttttggagtttagatgaagggaaacaactctac
actattcctcctccgtgttctgtgtcaagggagacaattccatgtgtcaaattatccagt
agatggggagacagagatggaaatacaggacttataatgggactgaaaaataaactctat
ttttatggaacattaccattgacctga
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