Ruditapes philippinarum (Manila clam): 132714241
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Entry
132714241 CDS
T09557
Name
(RefSeq) endoplasmic reticulum membrane-associated RNA degradation protein-like isoform X1
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
132714241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4209
Motif
Other DBs
NCBI-GeneID:
132714241
NCBI-ProteinID:
XP_060553031
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MDSIKLPKQQTCLSPYVHKLIIEDTFSEGRDACVFDQNGLLDFEYICSKLPAEGSQDDLA
SYFQTCVVKLAPMLHSVEDFMTDDKLSLKEKYCHLLEWTGQADQLLEVWDMMRNEDSIED
LTVLMVTTTFLERSLGNVYLINGPEPCPSMIKDLLVSEYLKAMLGSHVIQVLRVIIGPPT
SLNIRNVVWHGFPVPAEIPRRCIWFVILLVPSIGQILRNKNVTRITFREPVTFPDTSLIS
DTKLFIDENWSEVAGQSDLVCWNTQKFWEKVKQFYVNKKYSYCAAILLYYLEQGLRRVFA
TVNKCQHRILTAEATTLYTTFDEILDHSLPDDTENKLCQFLSPKFVEILLDHLQYQNGPR
VRDRLSHGDTCWILFPWQLTCNLATIAVALTAKFIPDTSIEEVLNRGISKVYRDISEYRV
QFHRITVLQKNIQRCCNQATKIDDLIRYNPDLSERDIGTEYPLSSLQVELSNDLQKCIVV
LYDKWTNNGVLHSPPDCMSYTSCSRFSSTIDDILSHPIHTLYRDKQYQVVDGHSTDREGE
VMSVLEHIISECLTVLNNLQDFVSVRQQQLLNKQLRSRQRENFKKFLTSFPAYVVVSNMS
SYLCCWQLYHLDYLKCSDGYTSKIRFWKKCLQFCENLRTYSQSDKNKWTEGLTLICEYQN
TLQSNLVTQLLCIHKDKT
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggattcaattaaacttcccaagcaacaaacatgcttatcaccttatgtacataaattg
ataattgaagatacattcagtgaagggagagatgcatgtgtctttgatcagaatggattg
ctggattttgaatacatctgcagcaaattaccagctgaaggatcacaagatgaccttgcc
agctattttcagacctgtgttgtaaaactggctcctatgttacacagtgttgaagatttt
atgacagatgacaaattatctttgaaagaaaaatattgccatctacttgagtggactggc
caagctgatcaattgttagaggtatgggatatgatgaggaatgaggacagtatagaggat
cttacagtgttaatggtgacaacaacctttctagagagatccctgggtaatgtgtacctc
atcaatggaccagaaccatgtccatccatgataaaagatttgttggtgtcagaatatctg
aaagccatgcttggtagtcatgtaatacaggtattacgtgttattattggtccaccaaca
tcattgaacatcagaaatgttgtctggcatggttttcctgttcctgctgaaataccaaga
aggtgtatatggtttgttatattactggtacccagtattggtcagattcttagaaacaag
aatgttacaaggataacattcagggaaccagtcacttttccagatacatcattaatttca
gacacaaagctgtttatagacgagaactggtcagaagttgctggacaatctgaccttgtc
tgctggaatacacagaagttctgggagaaagtgaaacaattttatgtcaacaagaagtat
agttactgtgctgctattctgttgtattatctagaacaaggtttgagacgagtatttgct
acagtcaacaaatgtcaacatagaattcttactgcagaggcaacaacattatatacaaca
tttgatgagatactagatcacagtctgccagatgatacagaaaataaactttgtcagttt
ctgtcacctaaatttgttgagatattattagatcatctacaataccagaatggtccaagg
gtacgagacagacttagtcatggtgatacttgctggatattgtttccatggcaactgaca
tgtaatctagcaaccatcgctgtagctttgactgcaaaatttatacctgacacttctatt
gaagaggtactaaatagaggaattagcaaggtatatagagatatatccgaatatagagta
cagttccacagaattactgttctgcagaaaaatatacagagatgctgtaaccaggcaaca
aaaatagatgatttaatcagatataatcctgatctctcggaaagggatataggtacagaa
tatcccctctccagtctacaagtagagctgagcaatgacttacagaaatgtattgttgtt
ttatatgataaatggacaaacaatggagtcttacatagcccacctgattgtatgtcctac
acaagttgctccaggtttagttcaacaattgatgatatattgtcacatccaattcacacg
ttatacagagataaacagtaccaggttgtagatggacatagtacagatagagaaggggag
gtcatgtcagtgctggaacatattatatcagaatgtctaacagtattaaataatctacaa
gattttgtttctgtcaggcagcaacagttgctgaataaacagctgagatcacggcaaaga
gaaaattttaagaaattccttacaagttttccagcatatgtagtcgtaagtaacatgagc
agttatctatgttgttggcagttatatcatcttgactatttaaaatgttcggatggctac
acatcaaagataagattttggaaaaaatgtttacagttttgtgaaaatttaaggacatat
tctcaatcagacaagaataaatggacagaaggattgacacttatatgtgaataccaaaat
acattacaatctaatcttgtaactcagttgctgtgtatacacaaggataaaacatga
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