Ruditapes philippinarum (Manila clam): 132714295
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Entry
132714295 CDS
T09557
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132714295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132714295
Transcription factors [BR:
rphi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
132714295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132714295
NCBI-ProteinID:
XP_060553108
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MTMPHVNSGGSDDIYGNSDEVKVYRDEGDEENEKRSSENLSEDKLGLVTETEEAKGGYAG
NEKTDRPNEEGKSQQEGSRDGPFGYLPNFPPYHNGSSPTTMYQLPGAVNPYLVFLQGNKV
PMLQSPLGVMMGYNNEPPFTSPPPAHMGIPPVTIDPKTGLPRHAFPYHTTAGQFPPSLYP
DVSWQRPPGYPISSGALGGHYPPSFINSSARFPAGFFPHGVPPGMSHGHLGAGPKQEGGV
SDNHRHGFNEGSGNQSPVPEKKKPHIKKPLNAFMLFMKEQRAKVVAECTLKESAAINQIL
GRRWHALDRSEQAKYYEMARKEKELHLQLYPGWSARDNYAVHAKKKKRKKDPMPGEKGTR
PDDRFMDNPAFGECTNSAKKCRARYGMEQQKNWCKPCRRKKKCIRTYDEGGGSDEEDGHM
SDSQMGEDSIHDSDSMPGSPAHSFTSDDPFSTPHRSRLQNVESPLVHDSSRDHQDMDTTM
KAHEDILPAHKSPFSMYKFSDHNLSGPDKYLSSRFNFPQASSPLSISSKSSGLNRSYSIE
SLAKSSVNSDCKETGDHNRSFDYALSPLSSPGDLSYQNSPKFSISTFAEDINKNLSPKKK
PSGLSNNFSISTLSVSAVTPSRIHCS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccgcatgtgaattctggcggcagtgatgacatttatggaaatagtgacgaa
gtgaaagtttacagggatgaaggtgacgaagaaaatgaaaaaagatcgtcagaaaatctc
tcggaggataagttgggactggttaccgaaactgaagaggcgaaaggagggtacgccgga
aatgagaagacagaccgaccaaacgaggagggtaaatctcaacaagaaggaagcagggac
ggtccttttggatacttgccaaatttcccgccatatcacaatggatcaagtcctacaaca
atgtatcagctgccaggtgctgttaacccttacctggtctttttacaggggaacaaagtg
ccaatgttgcagtctccacttggtgtcatgatggggtacaacaatgaacctccgtttacg
tcaccccctccagcacacatgggtatacccccagtcactatagatcccaaaacaggttta
ccccgtcatgcatttccataccacactacagcaggccagttccctccatcattataccca
gatgtcagttggcaaagacccccaggttatcccatttcctcaggtgccttaggtggacat
tacccaccctcatttattaactcatctgcacgctttccagcaggatttttcccccatggt
gtacctccgggtatgtcacatggccatttaggggcgggaccaaaacaggagggaggagtc
tcagacaatcacagacatggttttaatgaaggaagtgggaaccaaagtcctgtacctgaa
aagaaaaagcctcatataaagaaacccctgaacgcatttatgttatttatgaaagaacaa
agagcaaaagttgtagcagaatgtacactaaaagaatctgcagcaataaatcaaatatta
ggccgacggtggcacgctttagatcggtcagagcaggctaagtattatgaaatggcgcgg
aaagaaaaagaattacatctccagctgtatcctggctggagtgcacgagataattatgca
gtacatgctaaaaagaaaaaacgaaagaaggacccgatgcccggagagaaaggtacgcgc
cctgatgatcgatttatggacaatccagcctttggtgaatgtacaaatagtgccaagaag
tgtcgagctcgatacggtatggagcagcagaaaaattggtgcaaaccttgtcggaggaag
aagaaatgcattaggacttatgatgaaggaggaggttcagatgaagaagatggacacatg
agtgacagccagatgggtgaggacagtatccatgacagtgattctatgcctggtagtccc
gcccattcttttacaagtgacgatccattctcaaccccacacaggtcacgtctgcaaaat
gttgaatcacctcttgttcatgattcaagtcgagatcaccaagacatggacactactatg
aaagctcatgaagatattttacctgctcacaaatcgcctttttcaatgtataaattttcc
gatcataatttatcaggaccggacaaatacttgtcttctcgattcaactttcctcaagcg
tcgtcaccgttgtcaatatcttcaaaatcttccggattgaatcggtcttacagcattgaa
tcactcgcgaaatcttctgtcaactctgattgtaaagagacaggtgaccacaacagatcc
tttgattatgctctttcacctctgtcaagtcctggtgatttaagctaccagaattcacca
aaatttagtatttcaacatttgcagaagacataaataaaaatttgagcccaaaaaagaag
ccaagcgggttgagcaacaattttagtatttccacattgtcagtatcggctgtcacgcca
tctagaatacactgtagttaa
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