Ruditapes philippinarum (Manila clam): 132714304
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Entry
132714304 CDS
T09557
Name
(RefSeq) HEAT repeat-containing protein 5B-like isoform X1
KO
K24814
HEAT repeat-containing protein 5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132714304
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
132714304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laa1_Sip1_HTR5
HEAT_2
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_EZ
HEAT_ECM29
DCB
CENP-B_dimeris
DUF3246
Motif
Other DBs
NCBI-GeneID:
132714304
NCBI-ProteinID:
XP_060553127
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MMELAHSLLLNEEALQKIPDNKKPVFVFEWLRFLDKVLSAAQKSDIKEKQKRLVEQLINQ
ISESPGPPTRKLLARCLATLFIVGDSFAMFDAINKCNEIAKSKDDSPSYLPTRLAAVACL
GGIYEKMGRMTGRSYEETVQALIKSLKSAESQCRGETMMTLEKIVKGLGTAGQQSYKDVY
KAAKAAMTDRAMAVRTAAAKCMYQLVNEAPFMSTTEMETVVSLCYRALDGSNYDARYAVA
ELLGNLCATTLNPKPNTTNARSKPVKLEDVLGLLSAGFLRGGFGFLKSSTSSSSAGVNRE
IRVGVTHAYVEFIKCMGGLWLERNISTFLNHVLELVANPRATPTHVDAVYARKCVSFIIR
SVIGGLLGEKAQIAAAKEICQIIIKQMNFVGEASADAAESKATAADITGSQHVLVCALHE
LGCLVLSLGTSASPLVAEPATGIIEPVVSVLIHPSASARLSASWCLGSISVALPSQLTPL
VDRCIERMNKLKSSPEAVSGYSSALTSLLGRVYQCPLGIPHAKGKQIFNIAEELLRTASQ
NSRLSLQRTQSGWLLLGALMTLGSPVIKGHLPRMLLLWRNAFPRSVKELESEKARGDSFT
WQVTLEGRAGALGAMLSFLQHCRELITEDVIRRLLAPLECTLTMLAHMPGVIKMYGTHLK
ASAAMVRLRLYDVLSMLPPQSYEGTYTSLLRELVAEFTLTDNPANTTTSLLRSLCHVDDS
VILGSWLQETDHKAVEDQYEPNRRVDHDILQPNSASGSGALEHDAHSLFYRCPISDPIPG
PLPLGVAVIDSSVRLYGLIFPRVAHKHRYQMLQHFNECIKQAKSTRQQAVQMNIFTAVLC
ALKSLSDTKTKLGPDEVKKAAFNLILGALSSTNPILRCAAGEALGRMAQVVGDSKFIAEM
AQYSFDKLKSARDVVSRTGNSLALGCLHRYVGGMGSGQHLNTSVSILLALAQDFNSPVVQ
VWALHALALIADSGGPMFRGYVEPTLSLVLQLLLSVPPTTVDVHQCLGKCLSALITSIGP
ELQGNSGSIATARLSCLVCCAIMQDHSDSLVQAEAVACLQQLHMFAPRHVNLGTLVPHLC
EKLVSSHLLLRRAVVACLRQLVTREAKEVSVHALALASDEADKIEKFGITETGMEGKLFG
MCDTEVDGKLISDLQDTLVSLLQTLATKDLTRWLNLLREILSSSTDATSNQQDESQGNNN
DDDDDDEDNENDAEEFTAPEVDVTHPTVAPRWPTRVFATDCLRKIVVACEEDLTHFDLET
AREAKKDGKCDFLVLHLSELVRMSFIAATSDSNQLRLAGLAALQDIITKFCNVPEPEFPG
HVILEQYQAQVSAALRPAFSPETPSDVTAAACDVCSTWIGSGVARDLNDLRRVHQLLVSS
LGKLNAGKSQCALYNESASTMEKLAVLRAWAEVYIVAVSREHGNPDTLLKSTDEDDFDNK
GESLLTLVQSELPTLSQNWFLALKDHALLSLPTEFSGQLPSDGGAFYHVDTIDSARPHYR
KSWPSILHALAIWLKEAGFAKLNKDMGHPGGESQPTNAPANLYSEEANAERLYLIIGICV
EAMCNTTIQLPEHTAETCLHAIHALLESPWARAQVAKDPVLYKELLNVMHRVFLTHSGVK
VHLAVMDVVRCVVKAAQEHLKFLKQMEESKSDKESKESKILLPPGGEGGESGEVIPGQSI
VFATLEVCLGVLSRRVPALNPAAQTTGFQMSKKHSQVTEEISQLLSNVVQVLADLSSLCS
VPGSLAVLPTVFHLILGLLREMSPISMDKQNSAVVTVCINCIRTLLNSKRYEGDKKLPDW
HKLIQSSLATVIKNSISDADYPGMDETTYLYTITVFIICASHVINKNIVLVKPCIKAYLD
CWQSEHTHIRLKCCQLFTTLISQISSEDAMPYIHIMAPKIIDYLYTCSTSPPETELERDL
LLASINTFQMLIGIAEENKRITLLTVFLPILVSYLLDEKSLPTASKISRRIHDESLSHLM
KIGPQYPAQFRVIMTKQTDLKARLETAIKVNQEAKSALIKAQEKAKIAAQPAKPTITLKT
NFGSFA
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattagctcacagccttctcctcaatgaggaggctttgcagaaaattccagac
aacaaaaagcccgtttttgtgtttgaatggctcagatttcttgacaaggtcctttctgca
gcacaaaagtctgacattaaagagaaacagaagcgtcttgttgaacagttgataaatcag
atcagtgaatcacccggtccaccgaccagaaagttactggcacgatgtctggctacactc
ttcatcgtcggagactcatttgctatgtttgatgccatcaacaagtgcaatgagattgct
aagagcaaagatgattctcctagctacttaccaaccagattggcagcggttgcatgtcta
gggggtatatatgagaagatgggacgtatgacaggtagatcttatgaggaaacagtacaa
gctcttatcaaatctctaaaatctgctgagtcacaatgtcgtggagagacaatgatgacg
ttagagaagatagtgaaaggtttagggacggcaggacaacagtcatataaagatgtctat
aaagcagctaaggcagcaatgactgatagagcgatggctgttagaacagctgcggcaaag
tgtatgtaccagcttgtaaatgaagcaccatttatgtcaacaactgagatggagactgtt
gtatcgttatgttatcgtgcacttgatggttctaactatgatgctagatacgctgtagca
gaattactgggcaacctgtgtgctaccactctaaaccctaaacctaacacaactaatgca
cgcagtaagcctgttaaactagaggatgtattgggactgttatcagctggtttcctgaga
ggaggatttggttttctgaagagcagtacctcgagtagtagtgctggtgtgaacagggag
atcagggtcggagttactcatgcatatgttgagtttatcaagtgtatgggaggactttgg
ttagagagaaatatttcaaccttcctcaatcatgtgttagaacttgttgctaaccctcgt
gccacgcccactcatgttgatgctgtgtatgccaggaaatgtgtatcgtttattatccgt
tctgtgattggtggattactaggagaaaaagctcaaatagctgcagcaaaagaaatatgt
caaatcattattaaacagatgaattttgttggtgaagcaagtgctgatgctgcagagagt
aaagctacagctgctgatattactggcagtcaacatgtacttgtgtgtgctttacatgag
ttaggttgtcttgtccttagtttaggcacatcagctagtcccctagttgcagagcccgct
acaggtataattgagccagtagtgtctgtcctaattcatcccagtgcctcagcacgcctg
tcagcatcttggtgtctaggcagtatatctgtagctctaccatcacaacttacaccccta
gtggacagatgtatagagagaatgaacaagttaaaatcttcaccagaagctgtgtcagga
tatagtagtgctttaacatctttactggggagagtttaccagtgcccgttaggtatacca
catgctaaaggaaagcaaattttcaacatagcagaggagttactacgtacagcatcacaa
aacagtagattatctctacagaggacacagtctggctggttgttactcggagctttaatg
accttaggttcacctgtaataaagggacatttacctagaatgttgttgctatggagaaat
gcattccccaggtctgtaaaggagcttgaatcagagaaagccagaggagattcattcaca
tggcaggtcacactggaaggacgggccggggcactaggtgcgatgcttagcttcttacaa
cactgtagagaactgataacagaagatgtgatacgtagattactagcacctttagaatgt
acccttacaatgttagcacatatgccaggagtaattaagatgtatggtactcatctgaaa
gcaagtgctgccatggtcagactgagattatatgatgttctatctatgttaccaccacag
tcatatgaaggtacatacacaagcttgttacgtgaacttgtagcagaattcactctgaca
gataatcctgctaatacaacaacgtcacttttacgatcattgtgtcatgttgatgacagc
gttatacttggatcctggttacaggaaactgatcataaagctgttgaagatcagtatgaa
ccaaatcgtagagtcgaccatgatatacttcaacctaacagtgcatcagggtctggagca
ctagaacatgatgcccactctctcttctacagatgtcctataagtgaccctattcctgga
ccattaccactgggtgttgcagtaattgacagttcagtgcgactatatgggttgatattc
ccgagagtggcccacaaacatcgttaccagatgttacaacattttaatgaatgcatcaaa
caggccaagtctacaagacagcaagctgtacaaatgaatatattcactgcagttctgtgt
gctctcaagagtttgtcagacacaaaaacaaagttaggtcctgatgaagttaagaaagct
gctttcaatcttatattgggagctttaagtagtaccaaccctatattaagatgtgctgca
ggagaagcattgggtagaatggcccaggttgttggtgatagtaaatttatagctgagatg
gcacaatatagctttgataaattaaaatcagcaagggatgtggtgagtcgtacaggaaac
tctctagctctaggttgtttacatagatatgttggtggtatgggatcaggtcagcatctc
aacactagtgtatcaatactccttgctctagcacaagattttaactcacctgttgtacag
gtttgggcattacatgctttagcattgatagctgacagtggtggtccaatgttccgaggt
tatgttgagccaacattatccctcgtgttacagttactgttgtcagtacctcctacaaca
gttgatgttcaccagtgtctaggcaaatgtctgtctgctctcatcacatctataggaccg
gaactacaaggtaattctggatcaatagctacagcaagattatcttgtctggtatgttgt
gctattatgcaggatcactctgactccctagtgcaggccgaggctgtagcctgtctacaa
caacttcacatgtttgctcccagacatgtcaacctgggtacacttgtacctcatctctgt
gagaagctggttagttcccatttactactaagacgagcagttgtggcatgtctaagacag
cttgtcactcgtgaagctaaggaagtgagtgttcatgctctagcccttgcatcagacgag
gctgacaagatagagaagtttggtatcacagagactggtatggaggggaagttgtttggt
atgtgtgatacagaagttgatgggaagctgatatcagatctacaggatacactcgttagt
ttattacaaactctagcaacaaaggatctgacaagatggttgaatctacttagagaaata
ctttcatcttccactgatgcaacaagtaaccagcaagatgaatctcaaggtaacaataat
gatgatgacgatgatgatgaagacaatgagaatgatgctgaagagtttacagctcctgaa
gtggatgttactcacccaactgttgcaccaagatggccaacacgtgtgtttgctacagat
tgtttgagaaagattgttgtagcatgtgaagaagatttaacacactttgatctagaaact
gcaagagaggctaagaaagatggtaaatgtgatttcctggtgctacatttatcagagtta
gtaagaatgtcatttatcgcagccacatcagacagtaatcaactacgtctagcaggactg
gctgccctacaagatatcatcactaaattctgtaatgtacctgagccagaatttcccggt
catgttatcctagaacaatatcaggcacaggtaagtgcagcattacgacctgccttctct
ccagagacaccctctgatgtgacagcagctgcttgtgatgtatgtagtacatggatagga
agtggtgtagcgagagatttgaatgatttgaggcgtgttcatcaacttcttgtttcatca
ttgggcaaacttaacgctggcaagtcccagtgtgctttatacaacgaatctgcatctacc
atggaaaaattagctgttctcagagcatgggcagaggtatatatagtagctgtaagtcgt
gaacatggtaaccctgacacattactcaagtcaactgatgaagatgattttgacaacaaa
ggggaaagtttgctaactctagtacagtcggagttacctaccttaagtcagaactggttt
cttgctctcaaagatcatgctcttttatctcttcctacagaattctctgggcagttacca
tcagatggtggagcattttaccatgtagacacaattgactctgcacgaccccactatagg
aagtcatggccatctatattacatgccttggctatatggttgaaagaggcaggttttgcc
aagttgaacaaagatatggggcaccctggaggggaatcacaaccaacaaatgctcctgct
aatctatactcagaggaggccaatgctgaacgactctatctaattattggtatatgtgtt
gaagctatgtgtaatacgacaatccagttaccagaacatactgctgagacctgtctacat
gcaatacacgccctacttgagtctccctgggctcgcgctcaagttgccaaagatcccgtt
ctatacaaggaacttctaaatgtcatgcatagggtatttttaactcactctggtgtaaaa
gtacatttagctgtgatggatgttgtcagatgtgttgttaaagcagcacaagaacatctt
aaattcctcaaacagatggaagaatcaaaatctgacaaggaatcaaaagaaagtaaaata
ctgctgccacctggtggtgagggtggtgaatcaggggaagtgattcctggtcagtctata
gtctttgctacattagaggtgtgtttaggagtattatcacgccgtgttccggccttgaac
ccagctgcacagaccacagggttccagatgtctaaaaaacactcacaggtgactgaggag
atatcacaacttctctctaatgttgtacaggtgctagctgatctatccagtctttgttct
gtcccagggagtttagctgttcttccgacggtgtttcacctgatactgggactgctgaga
gagatgtctcctatatctatggataaacagaacagtgctgttgtcactgtgtgtattaac
tgtatacgaactttgcttaactctaaaagatacgagggtgataagaaattacctgattgg
cataaactcattcagagttctctagctactgtgataaaaaattctatatctgatgcagat
tatcctggtatggatgagacaacatatctctacaccatcactgtgttcattatatgtgca
tcacatgtaatcaacaaaaatattgtgttagtgaaaccctgcataaaggcttacctagac
tgctggcagtctgaacatacacatataagattaaagtgttgtcagttatttacaactctg
atctcccagatcagttcagaagatgccatgccttatattcatataatggctcctaaaatc
attgactacttatacacgtgtagcacgagtccacctgaaacagagttagagagagatcta
ctccttgcttctattaacacatttcaaatgttgataggaatagctgaagaaaataaaaga
ataactttgctgacagtttttctccccattcttgtgtcatatctactggatgagaaatct
ttacccacagccagtaaaatatctcgtagaatacatgatgagagtctctcacatctcatg
aagataggtccacagtatccagcacagttccgagtaatcatgacaaaacaaactgatctt
aaagctcggcttgaaacagcaataaaagtgaaccaggaagctaagagtgcactgatcaaa
gcccaggagaaggcaaaaatagcagcacaacctgctaaaccaaccattacactcaaaaca
aactttggtagctttgcttga
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