Ruditapes philippinarum (Manila clam): 132714311
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Entry
132714311 CDS
T09557
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
132714311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132714311
Transporters [BR:
rphi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
132714311
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SSDB
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Motif
Pfam:
SNF
DUF5345
Motif
Other DBs
NCBI-GeneID:
132714311
NCBI-ProteinID:
XP_060553137
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MDGKSIASKGSMQNGFDMIIEESQPMRVEEEQRQIENILTHANDTNMDVKFEEDITLPTK
AETEKLKFTSTFSTYMTLLGYTVGMSDFWRFPFLAYRNGGGAFLIPFVVMIILCGFPMYF
LEYSLSKFSGRGPYKIWDICPVFRGIGITVVAAFFLWMIGTTVLRCWIIDFLINAFQDPL
PWTLCTNSWNTKLCKDTLGEGSSNADNQSLDAIPLLNDSVTSIMFSMTSSLSTDVMNGRQ
NSSVHAILANSTGTLMTSAEEFWQYRVLELSSGISDLTPFQWRHVITLAVLRIVIGFGLV
KSIKSIEKVIYVTATVPFFLTVAIFIRSLMLPGSSLGILHFINPDFDKILQPRVWIEAML
MAFYTLGFGWGGNISLGSHAHFKENCLRTSIILPLVNLFMAAFSGLVCFSVLGNMAHSYD
VDITEVINAGMSVGIVAYITALSSLPFTQIWSVCFLAAIILTGINLVPMDMIMQLIGDVF
PRVRRGFRFHALVVTTIIFFLFSLPTCTGAGVYIFLWTDWYNGAWIGPIVAFIQLVVVAW
VYGMDRFSDDVHMMIGRPIPGLLRFLTAFITPLIVLIIFLVSCVKYVPPSYGSYTYSSTA
RVMGWLSVAIVMSPMVVQGLYTVNTSKEASYWKKLKQHLRPVESWGPCEEEFQGQFHSNK
AKYRNRSWKDLIYYNMFGKYPAPCPISTNKNQELDCLNKS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggacggtaaaagtatagcgtcaaaaggaagtatgcagaacgggttcgacatgataatt
gaagaaagtcagccgatgagagttgaagaagaacagagacaaattgaaaacatactaaca
cacgcaaatgatacaaatatggatgttaaatttgaagaagacataacattgccaacaaaa
gctgaaacagaaaagctcaagttcacatcaaccttcagcacctatatgactttgttggga
tatactgtagggatgtctgatttctggagatttccttttcttgcttatagaaatggcgga
ggagcgtttctaatcccattcgtggtaatgataattttgtgtgggtttcctatgtatttc
ttggaatattctttgtctaagttctctggtagaggaccctacaagatatgggacatctgt
ccagtttttagaggtatcggtataacagtagttgcagcattttttctgtggatgattggt
accactgtattgagatgctggatcattgactttcttataaacgctttccaagatccacta
ccctggacactttgtactaatagttggaacacaaagttgtgtaaagacactctcggtgaa
ggaagctcaaatgccgataaccaatcacttgacgcaatcccattattaaacgattctgtg
acgtcaataatgttttccatgacgtcatctttgtccacagacgtcatgaacggaagacag
aattcttcagtgcatgctattttggcgaattctacaggaacgttaatgacgtcagcagag
gaattttggcaataccgtgttttggaattgtcgtctggtatttctgaccttacacccttt
cagtggcgtcacgtgattactttagctgtgttacgtattgttataggttttggtcttgtg
aaaagtatcaaatctatagaaaaggtgatatacgttacagccacagttccgtttttcctg
acagttgccatatttatcagatcgctgatgctgcctggttcaagtcttggcatattgcat
tttatcaatccagattttgacaagattttacagccaagggtttggattgaagccatgttg
atggctttttatacactgggtttcggttggggaggtaatatatcactgggctctcacgca
catttcaaagagaattgtttaaggacatcgataatacttcccctagttaacctgtttatg
gcagcattcagtggattagtttgtttctctgttcttggtaacatggctcatagttatgat
gttgatatcacggaagttatcaatgcaggcatgtcagttggtatagtagcctacattacg
gctttgtcatcactaccgttcacgcagatctggtctgtctgttttctagcagctataatt
ctaacaggaattaatttggttcctatggacatgataatgcagctgataggagatgttttc
ccgagggtacggcgcggatttcggttccacgcacttgttgttacaacaattattttcttt
ctcttttcattgcctacgtgtactggggcaggtgtttacattttcctatggacggattgg
tacaatggtgcctggattggtcccatagttgcatttattcagcttgtggtcgttgcctgg
gtgtatggtatggatagatttagtgacgatgtacatatgatgataggcaggcctatacct
ggacttcttaggttccttacggcatttataacacctttaattgtcctgattatatttttg
gtaagttgtgtgaaatatgtaccgccgtcatacgggagttacacatattcttcaacagct
cgagttatgggctggctgagcgttgctatagtaatgagccccatggtagttcaaggactt
tacacagtaaatacatcaaaggaggcttcgtattggaagaaactaaagcaacatctcagg
cccgtagaaagctggggaccatgtgaagaagaatttcaaggacagtttcatagcaacaaa
gctaaatatagaaacagatcatggaaggatcttatatattacaatatgtttggcaaatac
ccggcgccatgtccaatatctacgaacaaaaaccaagagctggattgcttaaataaatct
tga
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