Ruditapes philippinarum (Manila clam): 132714358
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Entry
132714358 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04140
Autophagy - animal
rphi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132714358
04148 Efferocytosis
132714358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132714358
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132714358
Hops complex
132714358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
TPR_Vps41
Beta-prop_IFT140_1st
TPR_GEMI5
zf-RING_2
zf-C3HC4_2
Beta-prop_EML
zf-rbx1
zf-ANAPC11
Beta-prop_EML_2
PEX14-like_2nd
TPR_11
Motif
Other DBs
NCBI-GeneID:
132714358
NCBI-ProteinID:
XP_060553204
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MAFLQLRKFNFFDKETVKDPETSQIFDGLKDLNISACVSGRGQLIIGDFEGSIYMLSREL
KITSFTAYNIRVSHLFQMKQSNLLISIGEDEQGTNPLIKVWNLEKLEKGVPFVTRICRAI
PANKPTPVTCFTVHENLNWMAVGFENGSVVLFKGDVKSDRHSKQTVIYENPKPITGLSFK
TSGKNVILFVVTESVILSINVTAKDTAKDRNVNTLDEIGCKLGCSVMSDVSQDNHFVIGR
DDALYFYQPDGKGPCLAFEGEKFQLHWFRGYLVIVGKESKSFPKVPMIRSGHNMDMHIVT
VYDIQNKFIAYTAPYPDVIDVVSEWGSLYIIAGDRKVYQLQEKDTQTKLEMLFNKKNYTL
AISLAKSQQYDQDGLIDIFTQYGDHLYKKGDHDGAIDQYIKTIGKLEASYVIRKFLDAQR
IHNLTKYLQALHTARMATEEHTTLLLNCYTKLKDVSKLDEFIMTKDREVDFNVETAIKVC
RQAGYYKHALFLANKHQLHEWYLKIQLDDIKDYQKALEYIGKLEFAEAEENLKKYGKMFM
AERPQETTELLKRLCTDYKPTDRPLVEAVELEGSRSPGEVCRAPAEQFIHIFVNNSAKLI
EFLEHMISVYRNSPSLLYNTLIELYLHENKQANEKKILDILKNPEANYDLDQALVLCQMN
NFKAGILCLYEKARLYQQILRYHMDCDAHDLVIQTCKTYGTQDTNLWVQALSYFSKKENL
KSQLGIVLQHIDKMNLLPPLLVIQTLAHSSTATLSVIKNYVIRKLQSENEQIAEDERLIK
QYQDDTEKKRQQIEELKSTAKIFQNTKCSVCHHPLDLPTVHFLCEPHSFHQHCFESYAES
DTECPVCSVENRKIMDMIRAQEHGRDLHETFHNQLERAPDGFSVVADYFGRGVFNKVTVI
TDSPARLASVANKYSS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttacaactgaggaaatttaatttctttgacaaggagactgtaaaagatcca
gagacttcccagatatttgacggtcttaaggatctaaatatatcagcatgtgtaagtgga
agaggtcagctgatcattggtgattttgagggttctatctacatgttgtcaagggaacta
aaaatcacatcatttacagcatataacatcagggtatctcatctgtttcagatgaaacaa
agcaacctcttgatatctattggtgaggatgaacaaggtacaaacccattaattaaagtc
tggaatctagaaaagctagaaaaaggtgtcccatttgttactagaatctgccgagcaata
ccagccaacaaaccaaccccggtcacatgtttcactgtccatgaaaatctcaactggatg
gcagtaggatttgaaaatggtagtgtggtattgtttaaaggtgatgtcaaatctgatagg
cacagtaaacagacggtgatatatgaaaatcctaaaccaattactggattgtctttcaaa
acttcgggaaagaatgtaatactgtttgtagttacagagtcggtgatattgtctattaat
gttacagctaaagatacagctaaagatagaaatgtgaatacattggatgagataggatgt
aaactaggatgttcagtaatgagtgatgttagtcaagataatcactttgtcattggtcgg
gatgacgcattatacttttaccagccagatggtaaaggaccttgcctggcgtttgaaggg
gaaaagtttcagcttcattggtttagaggctaccttgtcattgtaggcaaagaaagtaaa
tcattcccaaaagtgccaatgatacgttctggtcacaatatggacatgcatatagtgact
gtttatgatatacaaaacaagtttattgcctacacagcaccatatccagatgtgatagat
gttgttagtgaatggggatccttgtatataatagctggagataggaaggtgtatcagtta
caagaaaaagatactcagaccaaattggagatgttgtttaacaagaaaaactatacactg
gcaatcagtttagcaaagagtcagcaatatgatcaggatggactgatagatatattcaca
cagtatggtgaccatctatacaagaagggcgatcatgacggggctattgatcaatatatc
aaaaccattggcaaactagaagcttcatatgtaatcagaaagtttctagatgctcaaagg
attcacaacttaacaaaatacctacaagcattgcatacagcaagaatggccacagaggag
catactacactgcttcttaattgttacactaaactcaaagatgtctcaaaacttgatgaa
tttatcatgacaaaggatcgtgaggtagattttaatgtggagacagctatcaaggtgtgt
agacaagcaggctattataaacatgctttattcctggccaataagcatcagctacatgag
tggtaccttaaaatacaacttgatgacatcaaagattaccaaaaagctctcgagtatatc
ggaaaattggaatttgctgaggcagaggagaatttaaagaagtatggtaagatgtttatg
gctgagagaccacaggaaactacagaattgttgaagagactgtgtacagactataaaccc
actgacagaccccttgtggaggcagttgaactagaaggaagccggtcaccaggtgaagtg
tgcagggcaccggcagagcagtttattcatatatttgtgaataactcggctaaacttatt
gagtttttagaacatatgatctctgtgtatagaaattcaccaagtctactttacaacaca
ctaatagaactttacttacatgaaaacaaacaggcaaatgagaagaagattctagacatt
ctgaaaaatccagaggcaaattatgatttggaccaagcattagtactgtgtcagatgaac
aactttaaggctggaattctctgcttgtatgaaaaagcaagactgtaccagcaaattcta
agataccatatggattgtgatgcccatgatcttgtcatacaaacttgcaagacttacgga
acacaagacacaaatctgtgggtgcaggcattgtcatatttttccaaaaaagagaacctg
aaaagccagctaggaattgttcttcagcatattgataaaatgaacttgctgccaccattg
ctagttattcagacattagctcacagttccacggcaaccttgtctgttatcaagaactat
gttatacgtaaactacagtcagaaaatgaacaaattgctgaggatgaacgtcttataaaa
cagtaccaggatgatactgagaaaaaacggcaacaaattgaagaattaaaatctacggca
aagatatttcagaatacaaaatgtagtgtgtgtcatcatccactagatcttcctacagta
catttcctgtgtgaacctcactccttccatcaacattgttttgaaagttatgctgagagt
gatacagaatgtcctgtatgcagtgtagaaaacaggaaaatcatggatatgataagggcg
caggagcatggtagagatttacacgagacattccataaccaattggagagggcacctgat
ggtttctccgtagttgctgactactttgggcgaggtgtatttaacaaggttacagttatc
acagactccccggcaagacttgctagcgtggcaaacaaatactcctcgtag
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