Ruditapes philippinarum (Manila clam): 132714392
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Entry
132714392 CDS
T09557
Name
(RefSeq) lariat debranching enzyme-like isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132714392
03009 Ribosome biogenesis [BR:
rphi03009
]
132714392
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132714392
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
RNase
132714392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
132714392
NCBI-ProteinID:
XP_060553239
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MKIAVEGCCHGELDNIYQTIEYLEKKNNFKVDLLLICGDFQSVRNMADMDCMAVPQKHKK
MNTFYKYYSGEKVAPILTIFIGGNHEASNYLQELPYGGWVAPKIYYMGYAGVVQVGGVRI
GGMSGIYKGKDYMKGHFEHPPYCEDSKRSAYHLRNFDVFRLKQVKNHIDIFMSHDWPRGI
YKYGNVNKLVKKKRFLADEIEKDILGNPMAADLLKLLQPTYWFSAHLHVKFPAVVQHTEE
INSKTTKFLALDKCLPRREFLQVIDVPHDSSKPIKLQLDVEWLAILKLTNHMLSLTKAPH
YPGGVPGERTKFTPTKAEMDAVCSCFGGNLTFPEKFEPTVPAYDPKLSKQQNKMPAPQPE
INPQTTLLCSMLDLTDPNAVFLGKDSQYDLPDDAESEKVDGAGDDDDDNDDVDDEDDSEL
SFISMTESEKSFSDRSISFMSTGNDSILSAGSESFISVGNPDEISINEDEENVAAAENLD
VNTNSNRGGVDSPGKLFKVQKRMSLSEKLKQCPPSESGSSSDTGPSSQDEVNDDAELADI
LAAQKSDRLKTGTGMFSPGKSDSDSEIVDSRNSSSSLDCKSLEISDDDPELQEMLSAQSS
NKKNESVIMEMSAETEDVEFQAIMAEQRKGKAVLESLPELTGDAELDKPLNHSSPIVNLE
NKYLEDSLEKTGQKRLDTPKCIKSPASKKFKRRNQDMYVKEDSVEEF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcagtagaaggctgttgccatggtgagctggacaacatatatcaaacaata
gaatatctcgagaaaaagaacaattttaaggttgacctacttttaatatgcggagacttc
caatctgtacgaaacatggccgacatggactgtatggctgtgccacagaaacacaagaaa
atgaataccttttataagtattactctggagagaaagttgcaccaatacttacaatattt
attggagggaatcatgaagcatcaaactatctacaggaactaccctatggtggttgggtg
gccccaaaaatatactacatgggttatgctggagtggtgcaggttggtggtgtcagaatt
ggtggtatgtcaggtatctacaaaggcaaagactatatgaaaggacattttgagcaccca
ccatattgtgaagattcaaaacgatcagcatatcacttgagaaactttgatgttttcagg
ttaaaacaggtaaaaaatcacatagatatcttcatgtctcatgattggccaagaggaatt
tacaagtatggtaatgtgaataaactggtgaagaaaaagaggtttcttgctgatgaaatt
gaaaaagatatcctaggaaatcctatggctgcagaccttctaaagttattacagccaaca
tactggttctcggctcatctgcatgtcaagttcccggctgtcgtacaacatacagaagag
ataaattcaaagactactaaatttcttgcattagataaatgtttaccaaggagggagttt
ttacaggtgattgatgtaccacatgacagctctaagccaatcaaattacagcttgatgtt
gaatggctggccattcttaaactgaccaatcatatgttgagtttaaccaaagcgcctcat
tatcctggcggggtgccaggagaaaggacaaagtttacgccaacaaaggcagagatggat
gctgtttgttcctgcttcggtggcaatcttacatttcctgaaaaatttgaacccactgtt
ccagcgtatgacccgaaactgtccaaacaacagaataaaatgccagcaccgcagcccgag
attaatccccagaccactttgctgtgtagtatgctagaccttaccgacccaaatgccgtg
tttctcggaaaagattcccaatacgaccttccagatgatgctgaaagtgaaaaagttgac
ggggcaggtgatgatgatgatgacaatgatgatgttgatgatgaagatgacagtgaacta
agttttatttcaatgaccgaaagtgagaagagttttagtgatcgaagtataagctttatg
tccacgggaaatgatagtatactttcagctggtagtgaaagttttatttccgttggtaat
cctgacgaaatttcaattaatgaagatgaggaaaatgttgcggctgctgaaaacttagat
gtgaatacaaactcaaatagaggaggagtagattctcctggtaaactgttcaaagttcag
aaaagaatgagtttatcagaaaagttgaaacagtgcccaccaagtgaatcggggagtagt
tcagatacgggtccatcttcacaagacgaggtaaatgatgatgcagaattagcggatata
ttagccgctcagaaatcagaccgattgaagacgggaaccggaatgttctctcccggaaag
tcggactctgactcggaaatagttgacagtagaaatagctcgtctagtttagattgtaag
tcactagaaatcagtgatgatgatccagaattgcaagaaatgttgtcggcacaaagttcg
aataagaaaaatgaaagtgtaataatggagatgtcagctgaaactgaggatgtagaattt
caagcaataatggccgaacagagaaaaggcaaggcggttttagaaagcctaccggaatta
acgggcgatgcggagcttgataaacctctaaaccattcaagtcctatagtgaatttggaa
aataaatatttagaggactctttagagaaaacaggacagaaaagactggatactccaaaa
tgtataaaaagtccagcgagtaaaaagtttaaaaggagaaatcaagacatgtatgtgaaa
gaagacagcgtagaagaattttaa
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