Ruditapes philippinarum (Manila clam): 132714472
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Entry
132714472 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132714472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132714472
Membrane trafficking [BR:
rphi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132714472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
132714472
NCBI-ProteinID:
XP_060553356
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MNVILAIKQYISKMIEESGPGMKVLLMDKETTSIVSMVYAQSEILQKEVYLFERIDSGGR
ETMKHLKCICFLRPTKENVDMLAQELRMSKYGLYYIYFSNVISKQDVKTLAEADDQEVVR
EVQEFFGDYIAVNPHLFTLNVQGCYKGIDWSPAALKRTTQGLTSVLLSLKKCPVIRYQNS
SEMAHKLAEHAKNTITKDAGLFEFRRTDVPPVLLILDRRDDAVTPMLNQWTYQAMVHELL
TINNNRVNLSKVHGISKDLQEVVLSAEHDEFYANNMYMNFGEIGNNIKELMDEFQKKSQS
QAKVESIADMKAFIENYPQFKKMSGTVSKHVTLVGELSRLVGTNSLLEVSETEQELVCKG
DHTASLQKIKTLLHNNSVSKKDKLRLVMLYALRYETHSNNDVSGLVETLRRQGAIDKQSG
LVSAIIEYGGRKSRGSDLFGSTDPVAFTKRFLKGLKGVENVYTQHKPLLHAILDQLTKGK
LREAAYPYLGTGQLKDRSACTSNN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttattttggcaatcaagcagtatattagtaagatgatagaggaaagtggtcca
gggatgaaagttcttcttatggacaaagagacgactagtattgtcagtatggtgtatgct
cagtcagagattctacagaaggaagtgtatttatttgaacgtatagattctggagggcgg
gaaacaatgaaacatttgaaatgtatttgtttcctacgaccaaccaaagaaaatgttgac
atgttagctcaagaattgagaatgtcaaaatatggattgtattatatatatttcagtaat
gttataagtaaacaagatgtaaaaactctggcagaagcagatgatcaagaggtagtaagg
gaagttcaggagttctttggtgattacattgctgtcaacccacacctgtttacattgaat
gtacaaggatgttataaaggtatagactggtcaccggcagccttgaagagaacaacacag
ggcctcacctctgtacttctatccctgaaaaaatgtccagtgatacgctaccagaactca
tcagagatggcacacaaactagctgaacatgccaagaatactataacaaaagacgcagga
ttgtttgagttcagacggacagacgtccctcctgttttattgatactggatagaagagac
gatgctgttacaccaatgttaaaccagtggacatatcaggctatggtacatgagcttctc
actatcaacaataaccgtgttaatctgtctaaagtacatggcatctctaaagatctacaa
gaagttgtactgtcagctgaacatgatgaattctatgctaataatatgtatatgaacttt
ggtgagattggtaacaacataaaagagttgatggatgaattccagaaaaaatctcaaagt
caagctaaagttgaatctattgccgatatgaaggctttcattgaaaattatccacaattt
aaaaagatgtcaggaactgtatctaaacatgtgacactggtaggtgagttgtcccgactg
gtcggcacaaatagtttgctcgaagtttcagagacagaacaagagctggtctgtaaggga
gatcatactgcttcactacagaaaataaaaacattgttacataacaacagtgtatcaaag
aaagataaattacgacttgtgatgttatatgccctacgttacgagacacacagcaataac
gacgtatcaggtctcgtggaaacattacgaagacaaggtgcaattgataaacaaagtgga
ttggtgtcagctataatagagtatggtggacgtaaatcaagagggagtgatttatttggc
agcacagacccagtggcatttaccaaacgttttcttaaaggtcttaagggagttgagaat
gtgtacacccaacataaaccattattacatgcaatactggaccagttaacaaagggtaaa
ttaagagaggcagcttatccatacctgggtactggacaacttaaagacaggtcagcttgt
actagcaataattga
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