Ruditapes philippinarum (Manila clam): 132714563
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Entry
132714563 CDS
T09557
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132714563
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
Others
132714563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
K319L-like_PKD
Fim1F_C
PND
Motif
Other DBs
NCBI-GeneID:
132714563
NCBI-ProteinID:
XP_060553435
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MARNQNIACVVFICIFNANSISGKVFSRSLSEYRNFQQPHIFSKYDNLNLRIRRSNSIEN
SSSADHVDTFHSSNLSTTSFALHGESDNEAFVHWTGKNNDTVFVLTRSHRHGAIQSSTLW
RSVDYGESYNKIDLPELFSVTYMYSSAADKSKIILSDLNQRQLYITEDTGQTWRHVKLNF
SPYRLLLHPSIGKIILAYSLREMKLYVSNDFGSSWTLMKERVTERFFWAVDGVDSNPSVV
HMELQDPMGPVTYFACLAPNCEEVDFDKALGTIDFYSLVVENEYIFVQKSTDDLTSFLVS
YKRGPFKRAYFPSNLTPLDFNVVDTSDNQVFIAVDHEEDIANLYLSDVTGQFYVTSVENV
VGMRYPGKFDVDLVKVKGLNGIYIINKFETSRVDGGVFSQRTYVTFNKGGTWKLINVPEE
SKRNCFDPEKCNLHLHIGNTNLFFRIPLAVSTKEAPGLILAHGSVGEFLDIDAQVFISRD
AGLTWKAAPFKGNHFLNIMDQGSAISAIAAHGLPTNQVHFSCTEGATWVTHNITSSEMNV
DGVVNEPGIRTLISSVFGHMNSSDGWVMVKMDFESVLHRQCNHGDFEQWQPAADLVENKV
KCIMGENLVYERRKQLSECYYGADYLRPKTTQICSCGREDFECDFGYKLGRDDTTCIKSD
WFSEDNFPSALCANGNYNQTKGYRKVAASKCTGGHEMKYLPVETTCPLLAPKGLSIYSEK
MCIQRGVNVTFTLTQESGSVEETVYTWSFGNGSSHVTIKGLQKAASITTSFSTVGTYNIT
VLAINSKGKAQAALTIHVEEGLKGVLVEIPWGARTDMPSYFNVTVLGSDNITKLGNEQPL
HFAWHFENKITGAIRQLTWQNVIQQEFHEPGEYKLTLNVFNSVSSVFYTQSVEVYDAMTT
VRIHFSEEINDYNSSSLNVRQALAEILCHNLAQILNIRRSRIIMSVPPTQPVVGDLTVLP
PNRDVNETETYQVVEMLIDQAKQQYLAFPLFTSDDIVIITDAGVLDLRTGAESSTVPPPP
VTVTVVVPVHVNMTTVEEKHSLVAVYISVPVLLAVIGLAVAIIFYYRKKLKSHKKYYPIV
KHRSRIHHDSTCSCGEEDILGLDDPEDTIIPDSDFPDNQPTLMILNEPRSGRNNRSPDRI
GLVNC
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaatcaaaacatcgcgtgtgttgtatttatttgtattttcaatgcaaattct
atatcagggaaagtatttagccgatctttaagtgaatatagaaattttcaacaacctcat
atattttcgaaatacgacaacttaaatttaaggataagaaggagtaattcaatagaaaat
tccagttctgctgaccatgtggatacctttcattcatctaatttgtcaacaacctctttc
gcattgcacggggaaagtgacaacgaggcatttgtgcactggactggtaaaaataatgat
actgtttttgttctgacaagaagtcacaggcatggtgccattcagtccagtacattatgg
aggtctgtagattatggggaatcatacaacaaaatagatttacctgaactgttttcagta
acctatatgtactcatcagcagccgacaaatcaaagataattttgtcggatttaaatcag
agacaattatatataacagaggacactggtcaaacctggaggcacgtgaaattaaacttc
tctccatataggttactgttgcatccatcaataggaaaaataattctagcttatagtctc
cgagaaatgaagttatatgtgtcaaatgattttggttcatcatggacattgatgaaggaa
agggtaacagagagattcttctgggcagtagatggtgttgattcaaatccatctgttgta
cacatggagcttcaagatccaatgggaccagttacttattttgcttgcctagcaccaaat
tgtgaggaagttgattttgacaaggcgctagggacaatagatttctactcattagttgta
gaaaatgaatatatctttgtgcagaaatccacagatgatttgacctcatttctggtgtcc
tacaagagagggcctttcaaaagagcatactttccatcaaatctaacaccattggatttt
aatgtagttgacacaagtgataatcaagtgtttatagcagtagatcatgaggaagatata
gcaaatctttacctatcagacgtaactggacagttttatgtgacatctgtagagaatgtt
gttggtatgagatacccaggaaagtttgatgtagatctggtcaaggtgaaagggttaaat
ggaatttatattatcaacaagtttgaaacatctcgtgttgatgggggcgtgttttcacaa
cggacgtatgtaacattcaataaaggtgggacttggaaactgataaatgttcctgaggaa
tcaaaacgaaactgctttgatccagagaaatgtaacttacatcttcatataggaaacaca
aacctgtttttccggatcccgctggcagttagcacaaaggaagccccaggattaatcctc
gctcatggaagtgttggagagttcctagatattgacgcgcaggtgttcattagtcgtgac
gcaggactcacatggaaagcagcaccatttaaaggaaatcattttcttaacattatggat
cagggaagtgcaatatcagctatagcagcccatggtttacctacaaaccaagtacatttt
tcatgcacagaaggtgctacatgggtcacacacaacataacaagctccgagatgaatgtg
gatggtgtagtaaacgagcctggtataagaactttaatatcaagtgtatttggacatatg
aactctagtgatggttgggtcatggtgaagatggactttgagtctgtgttacaccgccaa
tgtaaccatggtgattttgaacaatggcaacctgcagcagatcttgtggaaaataaggtg
aaatgcattatgggagaaaatcttgtatatgagcgaagaaaacagttgtcagaatgttat
tatggggcggattatttgcgaccaaagactacacagatctgttcttgtggtagagaagat
tttgaatgtgactttggttataaacttggtagagatgatacaacatgtataaaatctgac
tggtttagtgaagataattttccttcagctctttgtgctaatgggaactataatcaaact
aaagggtacagaaaggttgcagctagtaaatgtactggaggacatgaaatgaaatatcta
ccagtagagacaacatgccccctgttggccccgaagggtctcagtatttacagtgagaag
atgtgtatacagaggggagttaatgtcaccttcacactaacacaagagtcgggttccgtg
gaagagacagtctacacatggagttttggtaatggaagttcacatgtgacaataaaaggt
ctacagaaagctgcctccataacaacctcgttcagcacagtaggaacttataatatcact
gtacttgctataaatagtaagggaaaagcacaagctgctctaacaatacatgttgaagag
ggattgaaaggagtgttggttgagataccatggggagctaggactgacatgccaagttat
tttaatgttaccgtccttggctcagataatatcacaaaacttggaaatgaacagcccctc
cattttgcctggcattttgaaaacaaaataactggtgctattagacaacttacctggcag
aatgttatacaacaagaatttcatgaacctggagagtataaactcacacttaatgtattt
aattctgtcagttctgtattctatacacagtctgtagaagtttatgatgccatgacaact
gtccgtatacatttttcggaggagataaatgattataacagtagcagcctgaatgtgaga
caagcactggctgaaatactatgtcataatctagcacagattttgaatattagaagatca
cgcataatcatgtcagtgccaccgacccaaccagttgttggagatttaacagtacttcca
ccaaacagggatgtcaatgaaacagagacctaccaggttgttgagatgttgattgaccaa
gctaaacaacaatacctggcattcccattgtttacaagtgatgatattgttataattact
gacgctggagttcttgacttacggactggggcagaatcctccacggtgccacctccccca
gtaactgtcactgtagttgtaccagtccatgtaaacatgacaacggtggaagagaaacat
agtctagtggctgtttatatatcagtaccagttcttcttgcagttataggccttgctgtg
gctattatattttattatagaaagaagttaaagtcgcacaagaagtattatcctatagtg
aagcatagatcacgtattcaccatgattcaacatgttcatgcggagaggaagatattttg
gggctagatgatcccgaggatactatcatacctgactcagattttccagataaccaacca
acattgatgattttgaatgagccacgctccggacgaaataacagatctccagatcgtatt
ggactcgtaaattgttga
DBGET
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