Ruditapes philippinarum (Manila clam): 132714581
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Entry
132714581 CDS
T09557
Name
(RefSeq) prelamin-A/C-like
KO
K07611
lamin B
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132714581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132714581
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
132714581
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
LTD
CCDC39
FKBP15
SNCAIP_SNCA_bd
DUF8567
Rod_CreS
DivIC
HH_AprE
Motif
Other DBs
NCBI-GeneID:
132714581
NCBI-ProteinID:
XP_060553453
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MASRQSRKSTTTTVTESTSGETPRAGVSPGRRARSPSPARITRMQEKEQLQNLNDRLAAY
IDRVRYLETENSRLLVQVRSSEETVTREVTNIKSLYESELGEARKLLDDTAKEKAKLQLD
ASKYKTEADDWQAKFNRRDRDAKNADKKNLELQTELGDLQAKLNDAENNRKYAEGEAARL
RGEVASLERQLKELKKQLEEETLKRVDLENRIQSLKEELAFKSQVYEQELNETRTRTTTQ
YDEIDQGIREDYDSKLADALQQARLEHDEAIRQTHEELEELYATKVNDLQGALDRSMSVG
SSSREDYLLTKRRVDELSSEITKLKAQNAGYLSRIEDLENQLRSECDMFEQRLLQKDTEI
MDLRQALHDQTKEYADLLDVKLKLDIEIKAYRQLLEGEEERLNISATSSDSSTPKKGRGL
KRKRVTLDVSESTSAKSGYEYESEAAAKGAIEIHDTDHEGKFIKLFNTGEEDIVLGGWIL
KHEAGDKETVYKFHRNLKLPAGHFVTVWSSNAGQTHSPPSDLVMKGQQWFTDEEMKTTLL
HEDQEMASRVLKKTQRRVTRTYRTLRDGDDDVEGREKCSIM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagacagagtcggaaatcaacgacgacgacggtcacagagtcaacgtcggga
gaaacgccaagggccggcgtctcaccgggtcgacgagcacgctcaccatcccccgctcgt
atcacgcggatgcaggagaaagaacagcttcagaatcttaatgacaggttggcggcgtac
attgatagagtgcgttatttagagactgaaaatagtagattacttgttcaagtcagatct
tccgaggaaacagtcactcgtgaagttacaaacatcaaatcactttacgaatctgagctt
ggagaggctcgcaagcttctggatgacacagcgaaagagaaagcgaaattacaactagat
gcaagcaaatacaaaactgaagccgatgattggcaggcaaagtttaacagaagggaccgt
gatgctaaaaatgctgataagaagaatttagagctacagacggagcttggtgatctacag
gctaagctgaatgatgcagaaaataaccgtaaatatgcagaaggagaggctgcacgtctt
agaggtgaagttgccagtcttgagaggcagcttaaagaattgaagaagcagttggaggaa
gaaacattaaagcgtgtagatctagaaaacagaatacagagtctgaaagaggagctagcc
tttaagagtcaagtgtatgaacaggaattgaatgaaacacgtacaagaacaactacgcaa
tatgatgagattgatcaaggaatacgagaagattatgacagtaaactcgctgatgcactg
caacaagccagactagaacatgatgaagctatacgtcaaacacatgaggaactggaggaa
ctttatgctacaaaggtgaatgatcttcaaggtgcattggatagaagtatgtctgttggt
agctcgtccagagaggactacttgctgaccaaacgtcgagtagatgaactctcatcagaa
attactaaactcaaggctcagaatgcagggtacttgtctagaattgaggatttggagaat
cagctaagatccgagtgtgatatgtttgagcagcgcttgcttcagaaagacacagagatc
atggatctccgtcaagcccttcatgatcagaccaaggaatatgctgatctccttgacgtc
aagcttaaattagacattgaaatcaaggcttacagacagttgttggaaggggaggaggag
agactaaacatatctgcaacatcatcagacagcagtacccccaaaaaaggtcgaggcttg
aaaagaaaacgtgtgactttagatgttagtgagtcgaccagcgccaaatctggttacgag
tatgaatccgaggccgcagctaaaggtgccattgagatccatgacactgaccatgagggg
aaatttataaagttgtttaatacaggagaagaggatatagtacttggaggatggatactc
aaacatgaagctggagacaaagaaaccgtctacaagtttcacaggaatctcaaactacct
gcaggacactttgttactgtttggagttctaatgctggacagactcacagtcccccatct
gacctcgtaatgaaaggccagcaatggttcacagacgaggaaatgaaaaccacactactt
catgaagatcaggaaatggcatcaagggtgttaaagaagacacagcgtcgtgtaacaaga
acatacagaaccctccgtgacggagatgatgatgttgaggggagagaaaagtgttctatt
atgtaa
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