Ruditapes philippinarum (Manila clam): 132714600
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Entry
132714600 CDS
T09557
Name
(RefSeq) zinc finger protein DPF3-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132714600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132714600
03036 Chromosome and associated proteins [BR:
rphi03036
]
132714600
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132714600
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132714600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
zf_RING_Vps8
C1_1
ADK_lid
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
132714600
NCBI-ProteinID:
XP_060553473
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MTEITLRYDAIQKSIGGSDAYYNDAIEQAASFNVRLKNDRKMRLPFLDSQTGVAQSHTDL
WHTYRHRQPGKFPGQIYSYPERRWKKKRHYFLFPEERTAKTSEIETGESEISTPRRKQRQ
EVVQPDMHQISTVENPAARTEAEEFGDLKSETSKDKWYDDYDEYMEPPDAGEMCDDQSDI
SDFEQEYIKKRKRKGKGGGRVVRKKKVVEKEDKEKIDEEKEKPYACEVCNARYKTRPGLS
YHYNHFHNGMMEPEEPEPSPKSVVKTPPKLEKEERVKQTPIIILPERGEDGKIQNSNYCD
FCLGDADENKKTGTAEELVSCSDCGRSGHPTCLQFTTNMTISVKKYPWQCIECKSCGLCG
TSENDEQLLFCDDCDRGYHMYCLNPPLQEAPEGNWSCHLCIEEFHGGKKPAGMV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaataacactccgatacgatgcgattcagaaaagtattgggggctctgatgcc
tattacaatgatgctatagaacaagctgcaagcttcaatgttagattaaagaatgatcgt
aaaatgagactgccattccttgactcacaaactggtgtagctcaaagtcatacagatcta
tggcatacatacaggcacaggcaaccaggaaagtttccaggtcagatatactcgtatcca
gagagaagatggaaaaagaaacgccattacttcttgttccctgaagagcgtacagcaaaa
acaagtgaaatagagactggtgaatcagagattagtaccccaagacgtaaacaacgacaa
gaagtggtacagccagacatgcatcagattagtacagtagaaaaccctgcagcaaggaca
gaagctgaagagtttggagacctgaagagtgagacaagcaaggacaagtggtatgatgat
tatgacgagtacatggagccaccagatgccggggaaatgtgtgacgaccaatcagatatc
agtgactttgaacaggagtatatcaagaaaagaaaacgcaagggcaagggtggtggtaga
gtcgttcgtaagaagaaggtagttgagaaagaagataaggagaagattgatgaagagaaa
gaaaagccatatgcatgtgaagtgtgcaatgcccgttacaagactcggcctggattgtca
tatcactataatcatttccacaacggcatgatggaacccgaggagccagaaccctcaccc
aagtctgtcgttaagactcctccgaaactggaaaaggaggagagagtgaaacaaactcct
attataatactgccagagcgaggagaagatggtaagatacagaacagtaactattgtgac
ttctgccttggtgacgctgacgagaataaaaagaccggtacagccgaggaacttgtgtcc
tgtagtgactgtggaagatcaggtcacccaacatgtctacagtttacaactaacatgaca
atatcagtgaagaaatatccctggcagtgtatagaatgtaaatcatgtggtctctgtgga
acatcagaaaatgatgagcagttgttgttttgtgatgactgtgaccgtggttaccacatg
tattgtttgaatccgcctctacaggaggcacctgaaggtaattggagttgtcacctgtgt
attgaagagttccatggaggcaagaagccagctggcatggtataa
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integrated database retrieval system
