Ruditapes philippinarum (Manila clam): 132714643
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Entry
132714643 CDS
T09557
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132714643
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
132714643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
132714643
NCBI-ProteinID:
XP_060553527
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MGNKKKVGKQRRDKFYQLAKESGFRARSAFKLIQLNRKFEFLQNSRVVVDLCAAPGGWLQ
VCSENCPVSSLIIGVDLVGIKPIRNCKTLVDDITTEKCRQDLRKELQTWKADCVLNDGAP
NVGKNWVHDAFQQAHLTLQALKLATEFLKKGGWFITKVFRSKDYNSLLWVFQQLFKNVHA
TKPQASRNESAEIFVVCQNYLAPNRIDPKFLDAKSVFKDIEDEPTQSINLIHPEKQTRHR
DGYPEGDYTLFHTLKVSEFITSDNYLELLADASEVKFDDEGIENHPSTTAEIKECLKDIK
VLGKREIRLVINWRKKLKKEMEEKRIADMPDEKDAEEKVPEQDSEDDLAALEEQLNDLEG
EEKKALKRKIKKTRRERGRLQRKMDMKLVLPGDKLDMSEDRELFDLNRIKSKSQLQKVEE
VELSDIDYDEEEEDEVPKKKTKITWERDGIKEYQLPGEGSDGDDGNEDDQGSDDDDDSNE
EDADISLDEADLDDLNPLLVGKPGKKAKTDTWFSKDAFAGLEDDDDEDVEIEEMAKAYKE
KGGVITGMEEDMIIPEEKVKDINQTKVVKQKVISDDKDSAVEMNSDDSDSETSSESEGND
SDSDSDYDTKEFYKQQEKANKEKKGKAKKSNKSSGFEEVPAEEKSAYKLDTNGLAIGSAL
VSSRKRRREIIESGYHRYMFNDTNLPDWFEREERKHHRIPLPVTKGEVQEYKMKMKAVDA
NPIKKIAEAKARKKRKQMKRLQKARKKADAINDTEEVTDREKWQQIKQVYKKAGLLTSKK
KEVTYVVSKRGLAGKKVSRPQGVKGPFKVVDGRLKKDSRAQKRSEQRKKGKGKKRR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaagaagaaagtaggtaaacagcgccgtgacaagttctaccagttagccaag
gagagcggctttagagctcgttcagctttcaaacttattcagctgaacagaaagtttgaa
tttctgcagaactcgagagttgtggtagatctttgtgctgcaccaggaggatggcttcag
gtgtgtagtgaaaattgccctgtctcaagtcttatcattggtgttgacttggttggaatt
aagccaatcaggaactgtaagacattggtagatgatatcacaacggaaaaatgccgacag
gatttgaggaaggaacttcagacatggaaagctgattgtgttcttaatgatggtgctcca
aatgttggaaaaaattgggtccatgatgcttttcaacaggcacatcttactcttcaagca
ttgaagcttgcaacagagttcctgaagaaaggtggatggtttatcaccaaggtctttaga
tccaaagactacaactctttactctgggttttccagcagctctttaagaatgttcatgcc
accaaacctcaagcttctagaaatgagtcagcagaaatatttgttgtctgtcagaattat
ctggcaccgaacagaattgatccaaaatttttggacgctaaatcagtgtttaaagacata
gaagatgagcctacccaatcaataaatttgattcacccggagaaacaaacgcgacacaga
gatgggtatcctgaaggggactacactttatttcatacactcaaagtcagtgaatttata
acaagtgacaattatttggaattattagccgacgcctctgaagtcaaatttgatgacgaa
ggaattgaaaaccatccttctacaacagctgaaataaaagaatgcttgaaagatatcaaa
gtattaggaaaacgtgaaatcagattggttataaattggcgtaaaaaattgaagaaagaa
atggaagagaaaagaatagctgatatgccagatgaaaaagacgctgaggaaaaggtgcct
gagcaggatagtgaagatgatttggcagcacttgaagaacagttgaatgatcttgaaggt
gaggaaaagaaagcgttaaagagaaaaattaagaaaacaagaagagaaagagggagatta
cagagaaaaatggacatgaaacttgttcttcctggagacaagcttgatatgtctgaggat
agggaactgtttgatttgaatagaattaagtccaagagtcagttacaaaaagttgaggaa
gtagaactgagtgacattgattatgatgaagaggaagaagatgaagtgccgaagaaaaaa
acaaaaattacatgggaaagagatggtataaaagaatatcaactaccaggtgaaggttct
gatggagatgatggtaatgaggatgatcagggcagtgatgatgatgatgattccaatgaa
gaagatgcagatatttcactggatgaggctgatctagatgaccttaatccgttgttggtt
ggtaagcctggcaaaaaagcaaagacagatacgtggtttagcaaagatgcatttgccgga
ttggaagatgacgatgatgaagatgttgaaattgaggaaatggcaaaggcatataaagag
aaaggaggagttataacaggtatggaggaagatatgattattcctgaagaaaaggtgaag
gatattaatcagacaaaagttgttaaacagaaagtaataagtgatgataaagatagtgct
gtcgagatgaattctgatgatagtgattcggagacaagtagtgaatctgagggaaatgat
tcagattcagacagtgattatgatactaaagagttctataaacagcaagaaaaggctaat
aaagaaaaaaaagggaaagctaagaagtcaaataaaagttctggttttgaagaagtccca
gctgaggaaaagtcagcttataagttagatacaaacggtctagctatagggtctgctttg
gtatcttcaaggaaacgaagaagggaaattattgagagtggttaccataggtatatgttt
aatgatacaaatctcccagactggtttgagagggaagaaaggaaacaccatcgtataccg
ttgccagtcaccaaaggtgaagtacaggagtacaaaatgaaaatgaaagcagttgatgcc
aatcctataaaaaaaattgcagaagcaaaggctcgtaaaaagaggaaacagatgaaaaga
ttgcagaaggcaagaaagaaggcagatgcaattaatgacactgaagaagtcacagataga
gaaaaatggcaacaaataaaacaagtttataaaaaggctggtttgttgacttctaagaaa
aaggaggtaacatatgttgtatcaaagagaggacttgcagggaaaaaggtcagtagacca
caaggtgtaaaaggaccttttaaagtagttgacggaaggttaaagaaagacagtagagca
caaaagaggtcagagcaaaggaagaaaggaaagggaaaaaagaggagataa
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