Ruditapes philippinarum (Manila clam): 132714864
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Entry
132714864 CDS
T09557
Name
(RefSeq) toll-like receptor 1
KO
K10159
toll-like receptor 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132714864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132714864
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132714864
04054 Pattern recognition receptors [BR:
rphi04054
]
132714864
04090 CD molecules [BR:
rphi04090
]
132714864
00536 Glycosaminoglycan binding proteins [BR:
rphi00536
]
132714864
Membrane trafficking [BR:
rphi04131
]
Endocytosis
Phagocytosis
Toll-like receptors
132714864
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of breast milk
132714864
Pattern recognition receptors [BR:
rphi04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
132714864
CD molecules [BR:
rphi04090
]
Proteins
132714864
Glycosaminoglycan binding proteins [BR:
rphi00536
]
Hyaluronan
Cell surface receptors
132714864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
ETRAMP
zf-CGNR
DUF2627
Motif
Other DBs
NCBI-GeneID:
132714864
NCBI-ProteinID:
XP_060553765
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MKQRGCVYIHFILLALMLLETPGLIRMEKNDDCLLENSNVVCESRIPFVVPSKISGIVIR
DYLNNTIDNTTFAHDSWSYVDLLDITVNHIVWFRLYDYNIFSLKSLRHLGVHSPFYQFHN
EAKVFEGLSMLHTLNLSLCHYLDESAILKLLSPISHLDTLLLDQFASSGDRFFKIDNAFI
KAVHEKKIHKLSLSGCNLLFTGPLYVSNMSMVLYDIDISNTSLVKQVNMLINDTVLDMLL
PKIKVLDLSLLQMRFMSVDYDFLNNYIYDNKCTDTNGFLKFLLRVENLMLNSVLPKQLSA
NNSFIDLSQCNVDLRSLHLRSNHLHYLNVSILWPEDMSLSAIDMSSNDIEYLSPWLLNSV
TSLKVLNLSNNKLHHMQFSLEFSDLFINHTIIQRLVLSRNRLRFLPFAFLSYNTNLIMFN
LSYNKLPSISFDLKKMMKLQFLDLRNNDIYYIDGGELNSLKAFVTDFSTHRKIYLENNPF
ICNCKSSSFIKWLLVYMTNTFNQSMTCSLNEKDDVVINGAGIKETEFSCIRSKIIITSVS
TVVFLITFVSIGTGFMYYRKRKKKKGRRRKTFIDDFKLGYVPEKYLCFVSYSSEDNEADI
KQVCALIKESLQEFIQTNKELLCVGNEDFNLGIPIVDEIMKCISESCVGLFFVTTNFCQS
QWCEMELRETYELHKPIILIFKEEIDTCIMSPLMLKIFRQYTRAKIDFRDGQIQMIPNFN
QLSNSILMLESFAYCKEFL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaggggctgcgtatatattcactttattctgctagctcttatgctacttgaa
actccaggattgattaggatggaaaagaacgatgactgtttacttgagaattcaaatgtc
gtatgtgaaagtagaataccattcgtcgtacctagtaaaatatcaggcattgtgatcagg
gactacttaaataatactatcgataatacaacgtttgcacatgacagttggtcttatgta
gatttactagatataacagttaaccacatagtatggttccgtctttatgactataatatt
ttctcactaaagagtttaagacatcttggtgtacactctccattttaccagttccataac
gaggcaaaggtttttgaaggactatcaatgttacacacattaaacttatcgttatgtcat
tatctcgatgaatcagctattctaaaattactctccccaattagtcacctggatactctg
cttcttgatcaatttgcctcatctggtgaccggtttttcaaaattgataatgcatttata
aaagcagttcatgaaaagaaaatacacaagcttagcttgagtggatgcaatttattattc
acgggtccgttgtatgttagtaatatgtccatggttttatatgatatagatatttcaaat
acgtcacttgttaaacaggttaatatgttaatcaatgacactgtcctagacatgttattg
ccgaaaattaaggttttagatttgtccctactacagatgagatttatgagtgtagattat
gatttcctaaataattacatttatgacaataagtgtaccgacacgaacggtttcttaaaa
tttctattgagggtagaaaatcttatgctgaacagtgtactgccaaaacaattgagtgcg
aacaattcgtttattgacttatcacaatgcaatgtcgatttgcggtcattacatttaagg
tcaaatcacttacattatttaaatgtatcaatcctgtggcccgaggatatgtctctatct
gctattgacatgtcttcaaatgacattgaatatttatctccctggcttttaaattctgta
acatcacttaaagtattaaatctctcaaacaacaaattgcaccatatgcaattttcttta
gagttcagtgatttgtttattaaccatacaattatacaacgattggttctttctagaaac
cgtctaagatttcttcctttcgcgtttttgtcctacaacaccaacttaattatgtttaat
ttgtcatataacaaattaccttctatcagtttcgatttaaaaaaaatgatgaaattgcag
tttttggacttgagaaacaatgacatatattatattgatggtggtgaattgaactcatta
aaggcatttgtaacagatttctcaacgcatcgaaaaatatatcttgagaataatccgttc
atttgtaattgtaaatcatcaagttttattaaatggttactagtttacatgacaaatact
ttcaatcaaagtatgacttgttctttgaatgagaaagatgatgttgtcatcaatggggct
gggatcaaagagacggaattttcttgtatccgttcaaaaataatcatcacatcagtttca
acagtggtattcttaataacttttgtttccattgggactggttttatgtactacagaaag
cgaaagaagaaaaaagggagacgaaggaaaacatttattgatgatttcaaactaggttat
gttccggaaaaatatttgtgttttgtatcttattctagcgaagataatgaagcagatatc
aagcaagtttgtgctttaataaaagagtctttacaggaatttattcagactaacaaagaa
cttctttgtgttggcaatgaagattttaatctcggaattccaatcgttgatgaaataatg
aaatgtatttcagaaagctgtgttggacttttctttgtgacaaccaatttttgccagagt
caatggtgtgaaatggaacttcgagaaacatacgaattacacaaaccaattattctgata
tttaaagaagaaatcgacacttgcattatgtctccattaatgttaaaaatctttagacaa
tatacccgagctaagattgattttagagatgggcagatacaaatgataccaaattttaac
caattatcaaattccattttaatgctagagtcatttgcgtattgtaaagaatttttgtaa
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integrated database retrieval system
