Ruditapes philippinarum (Manila clam): 132714999
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Entry
132714999 CDS
T09557
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04136
Autophagy - other
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132714999
04136 Autophagy - other
132714999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132714999
04121 Ubiquitin system [BR:
rphi04121
]
132714999
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132714999
Membrane trafficking [BR:
rphi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132714999
Ubiquitin system [BR:
rphi04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
132714999
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132714999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
132714999
NCBI-ProteinID:
XP_060553944
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MKLKVDSSILKSHNVLSGKREIGLRFIFRNRVDDGVKWQCRNIFNTVKGTALGVAEYLTP
VLKESKFKETGVITPEEFVAAGDHLVHHCPTWHWSAGEESKRKPYLPADKQFLITKNVPC
YKRVKQVDNHQEEQEKVIEENDPDGGWVDTHHYADPQMGQVQEAVSDMTLDSKDKTSSAD
GGASTTKDDDDDDDDDDGEAMDMEAFEESGMLEENDTATLVVKTNVERQISESESGVLQT
RTYDLNITYDKYYQTPRLWLYGYDENRTPLTVEQMYEDFSQDHAKKTVTMEAHPHLPGPP
MASVHPCRHADVMKKIIEMVAEGGGDLGVHMYLMIFLKFVQAVIPTIEYDYTRHFNL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagtagactcttcaatcttgaagtcacataacgtcctatccggaaaaaga
gagattggacttcgatttatttttcgaaatcgtgttgatgacggtgtaaaatggcaatgc
agaaacatttttaacactgtaaagggtactgctctaggtgttgctgaatatcttacacct
gtcctaaaggagtcaaagttcaaggaaactggtgttataactccagaagagtttgtggca
gcaggtgatcatttagtacatcattgtccaacatggcactggtcagctggggaagaatct
aagagaaaaccttacttaccagcagataaacaatttctcattacaaaaaatgtaccatgt
tataaacgagtaaagcaggtagataaccaccaagaagagcaggagaaagtgatagaggag
aatgaccctgatggtggatgggtagatacacatcattatgctgatccacagatgggtcag
gtacaagaagctgtctctgatatgaccttagattccaaagataagacatcttctgcagat
ggaggtgcgtcaacaactaaagatgatgatgacgacgacgatgatgacgacggtgaagct
atggatatggaggcatttgaagaaagtggaatgctagaagaaaatgacacagccacttta
gttgtaaagactaatgtagagcggcagatatcagaatctgagagtggtgtgttgcagact
cgaacctatgatctcaacataacttatgataaatattatcaaacaccaaggctatggttg
tacgggtatgatgagaatcggactcctctgacagtagagcagatgtatgaagatttcagt
caagaccatgctaagaaaacagtaaccatggaagcccatccacatctaccgggaccacca
atggcttctgtacatccctgcagacatgcagatgtgatgaagaagataatagaaatggtg
gccgagggaggtggtgatctaggtgttcatatgtatttaatgatattcttgaagttcgtt
caagctgtaattccgaccatagaatacgactacacacgccattttaacttgtga
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