Ruditapes philippinarum (Manila clam): 132715171
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Entry
132715171 CDS
T09557
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03018
RNA degradation
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132715171
09123 Folding, sorting and degradation
03018 RNA degradation
132715171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132715171
03041 Spliceosome [BR:
rphi03041
]
132715171
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132715171
mRNA degradation factors
5'-3' decay
Lsm complex
132715171
Spliceosome [BR:
rphi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132715171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
132715171
NCBI-ProteinID:
XP_060554133
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSKKQTPSEFLKKIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRG
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaacagacaccaagtgaatttttgaaaaagatcattggaagaccagttgta
gtgaagcttaactctggtgtagattacagaggggtgttagcatgtttggatggttatatg
aatattgcccttgaacaaacagaagagtatgtaaatggacagcttaaaaacaaatatgga
gatgcattcattagaggcaataatgtgctttacatttcaacacaaaagagaagagggtga
DBGET
integrated database retrieval system
