Ruditapes philippinarum (Manila clam): 132715210
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Entry
132715210 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5-like
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132715210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132715210
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132715210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Glyco_transf_49
Motif
Other DBs
NCBI-GeneID:
132715210
NCBI-ProteinID:
XP_060554184
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MDFVSVKILVIVLEASTLTLAYSINDTKDLLTELFTSNSYNKKVRPIKDQDKEVNVTITF
QISAITQFDEQEESLTTAGYLSVEWVDEMLAWATADHNGISRLIVPQDDIWKPDISLRNS
FSSFKGLGSSYFNAWIISNGDVQWEPFQIFKSTCSVDITFFPYDSQTCEMKFIAWSYSKN
EVKFFLSSGIMKTDYSESATWEIAKMSSKASNEDTPTIIFTLKLNRKPLFYVLNMIVPVI
LLSFMNIFTFALPVKSGERASYAVTLFLSISVFLTIIASEFPKNSDNLSILALYLILMTS
VSTIFVLVSVLQIRLVNRDEENMVIGTFYKLLLRLVNVLICNKCNGRKKKVDAIGESKDT
DNSGIPDQSEAEAEVTWLDVVHAMDFLCFWIGSFVIFVVTLTIMLLLLNNPQRN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggactttgtttcggttaagatacttgtgatcgtgttagaagcgtctacgcttactttg
gcctattctataaacgatacaaaggatctactgacagaattatttactagtaactcatac
aacaagaaagttcgacccattaaagaccaggacaaagaagtgaatgttacaattacattt
caaataagcgctataactcagttcgatgaacaagaagaaagtctgaccactgctggatat
ctaagtgtcgaatgggtagacgaaatgctagcatgggcaacagcggaccacaacggtatt
tcccgacttattgtgccacaagatgatatatggaaaccagatatttcccttcgaaattct
ttcagctctttcaaaggtctcggttcatcttatttcaacgcatggataataagtaatgga
gatgtgcaatgggaaccattccagatattcaaatcaacatgctccgtagatataacgttc
ttcccttacgattcacagacatgtgagatgaaattcatagcgtggagttactcaaagaat
gaagtaaagttttttctatcgtctggaataatgaaaacagattattcggaaagtgcaacg
tgggaaattgcaaaaatgtcatcaaaggcttcaaatgaggacactccgacaatcatattc
acgttgaaactaaacaggaaacccctcttctacgtgttaaacatgatcgttccagtaata
ttactatcatttatgaacatatttacgtttgcgcttccggtcaaatccggagaaagggcc
tcgtatgcagtgacacttttcctatcaatttccgtctttcttactatcatagcctcagaa
tttcccaagaattcagacaatctctcaatcctagcactgtatttaattcttatgactagt
gtgtccacgatctttgttcttgtctctgttttgcaaattcgtctagtaaacagggacgag
gaaaacatggtgattggaacgttttacaaattgctccttcgacttgtgaatgtattgata
tgtaacaaatgtaatggtaggaagaaaaaagttgatgccattggagaaagtaaggacaca
gataattctggcatccccgaccagtccgaagcagaagcagaagtcacgtggttagatgtg
gtacacgcaatggactttctttgcttctggattggcagctttgtcatttttgtcgtcacg
ttgacgataatgcttcttttactgaataatccccagagaaactaa
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