Ruditapes philippinarum (Manila clam): 132715211
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Entry
132715211 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit beta-like 1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132715211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132715211
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132715211
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Glyco_transf_49
DUF4014
Motif
Other DBs
NCBI-GeneID:
132715211
NCBI-ProteinID:
XP_060554185
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MEFISFKIFVIVLEASTLTLAYSINDTKDLLTDLFTSNSYNKKVRPIKDQDKEVNVTISF
HISAITQFDEQEESLTTAGFLRVEWVDEMLAWKEADHNGIVRLIMPQDDIWKPDISLRNS
FSSFKGLGSPYFNAWVVDSGYVQWEPFQIFKSTCSVDITYFPYDSQTCEMKFTAWSYTPT
DVNFLSSTGISKTDYLESSTWDLASTSTKVLNVNTPTIIFTLKLNRKPLFYVLNMIVPVI
LLSVMNIFTFALPVKSGERASYAVTLFLSISVFLTIIASEFPKNSDNLSILALYLILMTS
VSTIFVLVSVLQIRLVNRDEENMVIGTFYKLLLRLVTVLKCNTCNGRKKRIDATGESTDA
RSSDILEQPEAEAEVTWSDVVHAMDFLCFWIGCFVIFVVTLTIMLLLLNNPQRL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatttcattcaaaatttttgtgatcgtgttagaagcgtctacacttactttg
gcttactctataaacgatacaaaggatctactgactgacttatttactagcaactcatac
aacaagaaagttcgacccattaaagaccaggacaaagaagtcaatgtaaccatttctttt
catataagcgctataactcagttcgatgaacaagaggaaagtctgaccaccgccggattt
ctaagagtcgaatgggtagacgaaatgttggcatggaaagaagcggaccacaacggtatt
gtccgacttataatgccacaagatgatatatggaaaccagatatttcccttcgaaattca
ttcagctctttcaaaggtcttggttccccgtatttcaatgcctgggtagttgatagtgga
tatgtgcaatgggaaccattccagatattcaaatcgacatgttccgtagatataacatat
ttcccttacgactcgcagacatgtgagatgaaattcactgcatggagttacacacctaca
gatgtcaatttcctgtcatcaactggaataagtaagacagattatttggagagctcaacg
tgggaccttgccagtacatcaacaaaggttttaaatgtgaacacgccgacaattatattc
acgttgaaactaaacaggaagcccctcttctacgtgctaaacatgatcgttccagttata
ttactatcagttatgaacatatttacgtttgcacttccggtcaaatccggagaaagggct
tcgtatgcagtgacacttttcctatcaatttccgtctttcttactatcatcgcctcagaa
tttcccaagaattcagacaacctctcaatcctagcactgtatttaattcttatgactagt
gtgtccacgatctttgttcttgtctctgttttgcaaattcgtctagtaaacagggacgag
gaaaacatggtgattggcacgttttacaaattgctccttcgacttgtgaccgttttgaaa
tgtaacacatgtaatggtaggaagaaaagaattgatgccactggagagagtactgacgca
agaagttctgatatcctcgagcagcccgaagcagaagcagaagtcacgtggtcagatgtg
gtacacgcaatggattttctttgtttctggatcggctgctttgtcatttttgtcgtcacg
ttgacgattatgcttcttttactgaataatcctcagaggctctaa
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