Ruditapes philippinarum (Manila clam): 132715251
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Entry
132715251 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132715251
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132715251
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132715251
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
132715251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Nup49_C
EXOC6_Sec15_N
Sec10_N
Motif
Other DBs
NCBI-GeneID:
132715251
NCBI-ProteinID:
XP_060554228
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MIRPQTKVPAGHWTRCDFCREKINFKSPREFCRHLRDFHCTKEGGSYVCKYGKNNVCLSL
PVDGVSDLDYEEHIMREHVNQSAEGTNSALQRLHASAQRPMPNPEPSVVQDQHKWTVYNS
KVNLPAALNDPRLVKRETDFFTKTWGVDFYEKSYLPSSPYVQEINRGHFQTYINRTSERF
KKHSRELQAVVEGRGPETHLTKMVRQAEKNRTELEQIPKLFLLPNFNLENPDTFNAVFPW
TQVEESKVNQTGSRHSSKLLQEKLSHYLDIVEVQIAQQISRRSEAFFHAMTSHDELQEKM
KVTCARIKYLRDKINNMDTMMAKESLKVLKLTKSRSSYVHLHNKLKLMATVHQTQPTIQT
LLSTNEFVGALDLISTTQEVLSQELAGVHSLRHLGSQLAELQKLIDIMIQEEFHKHVTSE
LNRPMSDSTPLLDEEKLVATLFGMLRLQKFQFLDVYRDETFTGMKAVVKQTVIEAVCAAD
DIDTDDSNISLADQMRLLNYTQWMELMKNIFHNLLIVLERAKAFHGIVVDVLGIAAGKTK
VPTPLHSPIEDRNGPLEEPLHLHVSVSDDVDVMITMEEYHKTIGGLRELLNSVCDHAHDR
CVKVVTARARDGFLERLSSSEFVALSKEVEKFVCQCEEVTGRRSMSLRGSLQSQANRFIN
RFHEERRTKLSLILDNERWKQADVPTEFQDLVYHISNTGHLCIPETKIEIERSPGEYLIV
DGDNYAVVGTVLLLLKMVIEYCQCSDDIPAVSADLLTRLVDLLKIFNSRTCQLVLGAGAL
ELVGLKTISTKNLALASRCLQLVVYYMPMVRKHFEEKLVNNKTINMLKHFDQILKDYQDH
IDEISNKLVTIMESMVDSQLSRWEVKAPMPSSCFRAICKQMAKLHEAIIDILPQEQVKAI
FTRINQTFKKVLRQQLVHLNVTNNGGPQHGLVTSDLTFYAGSFKTLRGLEDLAQDVHDVW
DKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgattagaccgcagacgaaggtaccagctggtcactggactcgatgtgatttttgtaga
gaaaaaatcaatttcaagtcgccgcgagagttttgccgtcatttaagagactttcattgc
actaaagaaggtggttcttatgtatgtaaatatgggaaaaacaatgtttgtttgtcacta
cctgttgatggagtaagtgacttggactacgaggaacacatcatgagggaacatgtcaat
caaagtgcagagggaacaaactcggcattgcagagattacatgcaagcgcccagcggcca
atgccaaacccagaaccctctgtcgtgcaggatcagcacaaatggacagtttataattca
aaagtcaatttaccagctgcgttaaatgacccacgtttggttaaaagagaaacagacttt
tttacaaagacatggggagttgatttctatgagaaatcttacctgccatcttcaccttac
gtccaggagatcaatagagggcatttccaaacttatatcaatagaacttctgagagattt
aaaaagcacagtagagaattacaggcagtggttgaagggagaggaccggaaacacacctt
actaaaatggtcagacaagcagagaaaaacagaacggagcttgaacagatcccaaaatta
ttcttattaccaaatttcaatttggaaaatcctgatacatttaatgctgtgtttccatgg
acacaagttgaggagtcgaaggtgaatcagactggtagccgacattcttccaagttgtta
caggaaaaactgagtcattatctagatatagtagaagtacaaatagcccagcaaatctcg
cggagatccgaggctttctttcatgcaatgacgtcacatgatgaactgcaggagaaaatg
aaagtcacatgtgcaaggatcaagtatctcagggataaaatcaacaatatggatacaatg
atggccaaggaatcattaaaagtgctgaaactaacaaagtcacggtcaagttatgttcac
ctgcataataagttaaaattaatggcaactgttcaccagactcagcctactatacaaact
ttgttgtctaccaatgagtttgttggtgcattagatctcatctcaactacacaagaagtt
ctctctcaggagctggcaggggttcatagtcttaggcatttaggttcccaactggcagag
ttacagaagctgatagatataatgatacaagaagaattccataaacatgtcacgtcggag
ctgaaccgacccatgtcagattccacaccactgcttgatgaggaaaaacttgtggcaaca
ttatttgggatgttaagacttcagaaatttcagtttcttgatgtatatagagatgaaacc
ttcactggtatgaaggcagtggtaaaacaaactgtgatagaagctgtttgtgcagcagac
gacattgatacagatgatagcaatataagtttagcggaccagatgagattattaaattat
acacaatggatggagctgatgaaaaatatattccacaatttattgattgttcttgaaaga
gcaaaggcattccatggaattgttgttgatgtattgggcatagcagctggtaaaaccaag
gttcctacaccgttacattcacctatagaggacagaaatggccctctagaggaaccttta
catttacatgtctctgtaagtgatgatgttgatgtgatgatcacaatggaggaataccac
aagacgataggtggtttacgagaacttcttaactctgtatgtgatcacgcccatgataga
tgtgttaaagttgttactgcaagagccagggatggatttttagaaaggctgtcttcctct
gaatttgttgcattatcaaaagaagtagagaagtttgtatgtcagtgtgaggaggtgact
ggtcgtagaagtatgtccctgcgtggtagtttacagagtcaggcaaacagatttattaat
agattccatgaagaaagaagaacaaaattaagtttgattttggacaatgaaagatggaag
caggcagatgtaccaacagaatttcaagaccttgtctatcatatatctaacacaggtcat
ttatgtattccagaaaccaaaattgagatagagagaagtcctggtgaatatctaatagta
gatggtgacaattatgctgttgtagggacagtgttattactattgaagatggtgatagag
tattgtcagtgttcagatgatattccagcagtgtctgcagatcttctaactagacttgta
gatctacttaagatatttaattcaaggacttgtcagctggtgctaggggctggtgcatta
gaattagtaggcctcaaaactatatcaactaaaaatctagctttagcatcacgctgtcta
caactagttgtttattatatgccgatggttagaaaacattttgaggagaagctagtcaat
aataaaacaatcaacatgcttaaacatttcgatcaaatattaaaggactatcaggaccat
atagacgagatctcaaataaactagtcaccataatggagagcatggtagattcacagtta
tcaaggtgggaagtgaaggctcccatgccgtcctcctgtttccgtgcaatatgtaaacaa
atggcaaaacttcatgaagctatcattgacattcttcctcaggaacaagtaaaggcaata
tttaccagaatcaatcaaacatttaagaaagtgttacgacaacaactcgttcatctcaat
gtaacaaataatggaggaccacaacatgggcttgtaacatcagatctgacattctatgcg
ggcagctttaaaacactgagaggccttgaagatttagcacaagatgttcacgacgtctgg
gacaagagatga
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