Ruditapes philippinarum (Manila clam): 132715296
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Entry
132715296 CDS
T09557
Name
(RefSeq) mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132715296
03015 mRNA surveillance pathway
132715296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132715296
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132715296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
132715296
NCBI-ProteinID:
XP_060554278
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MGIIDELRKTEKGKLPYQRNSTTESWKSLLETCTSPPDIHVSPKFFENLKSKKEENRKEN
QERESRCTNNSNDRLSISNESKESSVHKNSSSDNIYQDNIRIVRKCSVTSPEFGKSRLAI
RKYEDELENEARKARLKKQKEFEAIQNKIELEAQLKVQEIERKANFETLLKIQDIELRNE
SQAAEIVKQHRILKETHEQRKQIHDARIQEAEQVKKKLQLEEIRRKERENKERQDKLSKC
VSQLNQLFTKVQSDFNATKYQNFISETAKKSLNLIQSQVSNADAVNRACQQSGTVTAENC
EECVKILERAIKAYHVIQKELEKAEKDGKEAEAEKERQAKLQQEQSQAAAAAAAAASIEA
PLATSTPVPQASRSQTLITTGDISAQAASRGEQLCVDIEAFRKYTELQEKLKSVEEATAV
LSSTAELKKFKFDIQKAVNTSINAISPVSGDHLRDKLKRLLKLLSCQPVEVSGRQIQLNQ
HPQGPAFCKHLIARMIVKKGDEQVSSKHESAFAIGMVAAGLWTESPSIGEMLLAHFQAQC
PYLVPYYIPRQEGQSDADYFKSRGYKYENDVVEKHDKFLKRMSGIMRLYFSIIVSSPPRG
NHPHGIEYAWMWLTRVLNIEPEPDITTTMIYDCLQVTGNALCQVYKKQFLKLLHILVKEM
LPKLKSVSSDAGSGSLTRLQLLLETSVKHHGSIPPPDGFLEKNFWLS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggcattattgatgaactgaggaaaacagaaaagggcaaactgccgtatcaaagaaat
tctaccactgaaagttggaagtcgttgttggaaacatgtacatctcccccagatattcat
gtatcaccaaaattctttgaaaatttgaaatctaaaaaagaagaaaacagaaaggaaaac
caggaaagagaaagtagatgtacaaataattcaaatgatagattgtcaataagtaatgag
agtaaagaaagctcagttcacaaaaactcttcctctgataatatatatcaagataacata
agaattgttagaaaatgttcagtgacgtcaccagaatttggaaagtccagactggctatt
cgtaaatatgaagatgaactagaaaatgaggcacgtaaggcgagactgaagaaacaaaaa
gaatttgaagcgattcaaaataaaattgaacttgaagcacagcttaaagttcaagagatc
gagagaaaggctaattttgaaactttattaaaaatacaagacattgagctgagaaatgaa
tcccaggctgctgaaattgtgaaacagcatagaattttgaaagagacacatgagcaaaga
aaacaaatacacgatgccagaatacaggaagctgaacaagttaagaaaaagcttcagtta
gaagaaataaggcgaaaagagagagagaataaagagaggcaggacaaactgtctaaatgt
gtttcacaattaaaccaactgtttaccaaagttcagagtgacttcaatgctactaagtac
cagaacttcatctctgagactgctaaaaagtctcttaacctgatacaatcccaagtcagt
aatgcagatgcagtgaatagggcttgtcaacaaagtggcacagtcactgcagaaaactgt
gaagaatgtgtaaagatattggaaagagccattaaagcatatcatgttatacaaaaagag
ttagaaaaagctgaaaaggatggaaaagaagcagaggcagagaaagaaagacaggcaaag
ctacaacaagaacagagccaagctgctgccgccgctgctgctgctgcaagtattgaggct
ccattggccacctcaactccagttcctcaggcttcaaggtctcagactctcatcacaact
ggagacatatcagctcaggctgcttcaagaggagagcaactttgtgtagatatagaagct
ttccgaaagtatacagagttgcaggaaaaattgaagtcagtagaagaggcaacagctgtt
ttatcttcaacagcagagttaaagaaattcaaatttgatatacagaaagcagttaacact
tctatcaatgcaatatcacctgtcagtggtgatcatttaagagacaaattaaaacgcctc
ctgaaacttctgtcttgtcagccagtggaagtgtcgggtcgacaaattcaacttaatcag
catccccagggacctgcattctgtaaacatctcatcgctagaatgatcgtgaagaaagga
gatgagcaagtttcgtcaaagcatgagtctgcatttgctataggaatggtcgcagcagga
ttgtggacagagtcacctagtattggagaaatgttgttagcccatttccaggcacaatgc
ccataccttgtaccgtactatataccaagacaagaaggacagagtgatgctgactatttc
aaatctagggggtacaagtatgaaaatgatgttgtggaaaaacatgacaaatttttgaaa
aggatgtctggaataatgagactatatttttcaatcattgtatcttccccaccgagagga
aaccacccccatggcatagaatatgcctggatgtggctgacacgtgtgttgaacattgag
ccagaacctgatattaccacaacgatgatatatgattgcctgcaggttacaggaaatgct
ctatgtcaagtttataagaagcagttcttgaagttgttgcatattcttgtcaaagaaatg
ttgccaaagttaaaaagtgtgtcgtctgatgcaggaagtggttcattgacaaggttacag
ttgctattagaaaccagtgtgaagcatcatgggagtataccgccaccagatggcttcctt
gaaaagaatttctggttgtcataa
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