KEGG   Ruditapes philippinarum (Manila clam): 132715381
Entry
132715381         CDS       T09557                                 
Name
(RefSeq) nucleoporin p58/p45-like
  KO
K14307  nucleoporin p58/p45
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132715381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132715381
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132715381
SSDB
Motif
Pfam: Nucleoporin_FG2
Other DBs
NCBI-GeneID: 132715381
NCBI-ProteinID: XP_060554362
LinkDB
Position
Unknown
AA seq 545 aa
MSAGFGFNFAKPADGTANTTASGGFAFASSTPASTSGGLNFGQPATKTSASGLTLGTPAV
SQSAFGTQATTNTGLNVTQPTSTGTGLTLGGLSSTTSATPSLFGAASTAPTAAFGFSKPL
TVGSQATTTASTGLGLGLKLGTTTTQSSGLGGFGLTTTKSTTLGSGSIFGQNVAKTTSSG
LGGIGPTTTTATSTSNSSKPGENKVVKEMAVENSILLDVEELRKFVKEEKSEMEQMKRMS
STSMIKVQEDNAALKQLLSLVSSSLQKNACAVDKLKREMTQELKNAEMALRTKETPPGLQ
YENTAPTLYFHSLIEKFEGQMLTYRQQIEILENHLSSLHQPNRHTPEEMVLLLRKLHEAF
VAMAAQLQQIHEAVKTQKEHYLNFRKVFHGDNRNIFERQKKTAVKIGTKSHTDMYGQAPF
PAVNNAAAVAMATALTRSQHPQPTAGAPPVTGMSSFQPSSGFGAPASGFGAFGSTTQAST
FKGFGTGTSNFGTGTSLFGNSSNLATTLAGSLFTSTIPGATPQLNLSSEPFQLNKPPVGS
KRGKR
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgtcagcaggattcggatttaattttgcaaagccagctgatgggacagctaacaccact
gcttctggaggttttgcttttgcctcaagtactccggccagtacatctggtggattgaat
tttggacaaccagcaacaaaaacaagtgcaagtggtttaacacttggtacacctgcagtt
tctcaaagtgcatttggaacacaagctactacgaatactggtttaaatgttacccagcca
acatcaacaggtacaggattaactcttggaggtttatcttcaaccacatcagcaactcct
agcttgtttggtgccgcttcaactgccccaacagctgcttttggtttctcaaagccactt
acagtggggagccaggcaacaactacagcaagtactggtttgggtctcggcctgaaatta
ggaacaacaacaacacaaagtagtggtcttggaggatttgggctaaccaccactaaatct
actacattagggagtggaagtatatttggtcagaatgttgccaagacaacctcatcaggc
ctgggtggtattggaccaacaacaacaactgctacatctacaagtaactctagcaaacca
ggggaaaataaagtagtaaaggagatggctgtagaaaacagtattttactggatgttgaa
gaattgagaaagtttgtaaaagaggagaaaagtgagatggaacagatgaagaggatgtca
tcaacatcaatgataaaagtacaggaagacaacgctgccctcaaacaacttctctctctt
gtctccagctcgttacagaaaaatgcttgtgctgttgataaactaaagagagaaatgaca
caggagttaaagaatgcagagatggcattaagaactaaagagacacctccaggcttacag
tatgaaaacacagcaccaacattatattttcatagcttgatagaaaagtttgagggtcag
atgttgacatacagacagcagatagagattctagagaaccatctgtcctccctccatcag
cccaatagacacacccctgaagaaatggttttattgttgagaaaactacatgaagcattt
gttgccatggcagcacagttacagcaaattcatgaggctgtcaagactcaaaaggaacac
tatcttaactttaggaaagtatttcatggtgataaccgcaatatttttgagcgtcagaag
aagacggcagtgaaaattggtacaaagagtcacacagacatgtatggtcaggccccattt
cctgctgtaaataacgctgcagctgttgctatggcaaccgctctaacacgtagtcaacat
ccgcagcccactgcaggagctccacctgtcacaggcatgagcagttttcaaccttcatca
ggatttggcgcacctgcctcaggatttggtgcatttggatcaactacacaagcatcaact
ttcaaaggttttggaactggaaccagtaacttcgggacaggaacaagtctattcggaaac
agttcaaaccttgcaacaacgctggctggttccctgttcaccagtactataccaggagcc
acacctcaactcaatctctcgtcagagccctttcagcttaacaaacccccggttggatct
aagaggggcaaaagatag

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