Ruditapes philippinarum (Manila clam): 132715409 Help Entry 132715409         CDS       T09557                                  Name (RefSeq) focadhesin-like   KO K27498   focadhesin Organism rphi  Ruditapes philippinarum (Manila clam) Brite KEGG Orthology (KO) [BR:rphi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rphi03019]     132715409 Messenger RNA biogenesis [BR:rphi03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      132715409 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Focadhesin DUF3730 DUF4485 Motif Other DBs NCBI-GeneID:  132715409 NCBI-ProteinID:  XP_060554387 LinkDB All DBs Position Unknown AA seq 1797 aa AA seqDB search MFQTIERLFNDVKKKKPKGQLLSSATPEFVELKALWQYTCSEQGQVARQCSQLWIQLLKE QCADFTYVLNGFLNQVPTSKNLCGVVMGVSEMLTLQVILKCAANEEYVCPYEIRSPPHPF ISIITNRPAESWPLILEQIDRLFTHSDRRVQENVFVMLDPFIKFVLLDPKCSEQYSKLRS NMKVRLVNQVGKVDDRELRNEYMKYLIDLLSKMQVDTADNTVETAEYCIQLLHLYGNHAE SLDHCHGNRISVYVLELCQIYQEKNLDSYSLILAVLEMSKHTPEVLCTDVNICTLAQLIL QASNDDKILLLKIVKAVLENGHGILNPLCAGLVSMAAINVIATQQTATMTTQHKLLTSLA SDVIRLLEKYQMNSSQDVREELNTNLLSSNGYMTRAFVQLARSFSRNSSFLETWLFTIQK HLARKETVSPCLTNLLVSVLIKFPDEEISLLVIDRLSDVVKSDPSQGLYLLPVYLYVIGK SCCPKVNLHVLNALPKLATHKFNVAPVLKTILNLAQSPKMKSLSIKLLTELWALQDRCFP HILKAITESEKGSMKIGSVIDDVTLAKAMAIKEICRLRPEQHGAEMLGPLSELLTSSRDL SSSPVAALCLEALYYVCEAEMIDIMSAWKVLESQLITDTRVVVMVKTCELLSLVPSLQVK TAEYEDFLSESVRRLWLLTQCDVEMVKSAAFSALSKYSQEHFKISHFKYQIVKEFVEQGE AILAASENEGDTIDTVIPSVPGICYTRLLSELHGLTLTGFLDFLSAMVGKEAENLPRGIY FTSLRQQGSLSNQSKELTAIPNFVQSQYDKNKQPGLRASLAVALLFTYDPKIEVGRDGRP RKHYMLSHGKNYQQVFNTLLQDVPVQPSDWYRTSLMGQAWTAFVDRLFSAMLQARKAEID LQLNRDFIDEKEAEEKKLSAWFWVRDSIMDMIKKSTRGNPSVQFNAVLALSGLARSVHRY ISSLDSEERKRMDDVTEHTSHSHWLVIMIDSCMSLIDFTYMPKSTLFGLCQQRSVDDRLP ASILAQAAGILALCQIASLIMNNYIELVYQLLDMLIQWLPGKQSDDDCPPVLHFFRSLGL GVFLDQLISSNFTEIAGSKGSLAVWKALDKLEECCLSDSEHRTGALLGLSVSLGTLCQDG KTESRVHISAIHAKLKDALKQAPREHSNFQVLCTCIGLVTGTGFVSNILDKSCFDETLAI IQDLTDTNTQGAGICLALGSLCFAGEIGGHPEISQLKQKLISDWKTTLTKADGTELERVA SLYGLVSVMGYNGLYGNDDTKSLSTSRAGIDTVIKSIKDLVTSCDLVGIQATAGWLLGTI YMSASSTNYSSSVSAPGTYSYLQENSILRAVVDFLIQAGKQGPEFIPSKQVEACLVSLQR EVTATLPPLNWMGILSPLMKLQFDEEIKLLCIKLAVKLSSSSSSAALFLAAWIVPPLFNT LPVKFQCLLLSSAGHYVKTVTPDVLKSFLDKCCRPVFATSSAETGSKEGRALKIAVLKGL HSSLAVHDPPESVTAMLYDMVEFVYQHTGSESDVDVLINLAECLRNIPDSLLDKITTGDC TCKDSVTRGTFIRSFLVANGNQPITLLNSCIDATFNTECDRDKVLSILVHSFQRMMMLEG TKKPTLQCVQWLHEITGHCRNIAMGTFKLTAEDADISKATQFAVNIIAAAVCLWTSRSSV ASLLNINFDLLTVPTSGCEEGSDWLEKCFEHDDGRIDWSTGIKPLNCMQAYIQNLTSEPW NQILQKIVDWHVAMFETAEDIVSKDMKRKLMECLFCLRHCAEFKKLTTWTKAVMFTV NT seq 5394 nt NT seq  +upstreamnt  +downstreamnt atgtttcagactattgaaaggctattcaatgatgttaagaagaagaagccaaagggacag ctgctgtcttctgctactcctgagtttgtggagttgaaagcactatggcagtacacatgc tcagaacaaggtcaggttgctaggcaatgcagccagttgtggatacaacttttaaaggaa cagtgtgcagatttcacttacgttcttaatgggtttttgaatcaagtaccaacttcaaag aatctatgtggtgttgtgatgggggtgtcagagatgttaaccctacaagtcattttgaaa tgtgcggctaatgaggaatatgtgtgtccatatgaaatcagaagtccaccacatccattc atatcaattattacaaacagacctgcagagtcatggcccttgattttagaacagattgac agattgttcacccattctgatcgaagagtccaagagaatgtttttgtgatgttggatcct tttatcaaatttgtattattggacccaaagtgtagtgaacagtatagtaaattacggtct aacatgaaagtgaggctggtgaatcaggtcggaaaggttgatgatcgtgaattgagaaat gaatacatgaaataccttatagacttgctgtccaagatgcaggttgacactgcagacaat actgtagaaacagcggagtattgtattcaacttcttcatctctatggtaaccatgcagaa agtcttgaccattgtcatggtaacaggataagtgtgtatgtccttgaactgtgtcagata tatcaggagaagaatctggacagttactctctaatcctggctgtcctggaaatgtctaaa cacacacctgaggtactatgtacggatgtgaatatttgtactcttgcccagcttattctg caggcatctaatgatgataaaattcttctactaaagatagtgaaagctgttttggagaat ggacatggaattttaaaccctctctgtgctggactggtgtcaatggcagccattaatgtc atagcaacccaacagactgctaccatgacaacacagcataaactgctgacatcactggct tctgatgtcatacgtctgctggagaaataccaaatgaattcatctcaagatgtaagagaa gaactgaatacaaacttgttgtctagtaatggctacatgacacgtgcatttgtgcaactg gctcgttctttctccagaaattcctcttttctggaaacatggctctttacaatacagaag cacttagcaaggaaggagactgtgtcaccatgtttgacaaatttactggtatctgtcctg ataaagttcccagatgaggagatcagtctgcttgtcatagacagattgtctgatgttgtg aaatcagacccgtcacagggtttgtacctgctacctgtttacctgtatgttataggaaag agctgctgtcctaaagtaaatcttcatgtattgaatgcacttccaaaacttgcaactcac aagttcaatgtggcacctgtcctgaagaccattttgaatttggcccagtctccaaaaatg aagagtttgtcgattaagcttttgacggaattgtgggccttgcaagatcgatgtttccct catattttaaaggcaataacagaaagtgaaaaaggaagtatgaaaatagggtctgtgatc gatgatgtgaccttggcaaaggcaatggcaataaaagagatatgtagattaaggccagag cagcatggtgcggagatgttaggacctctctcggaactgttgacttccagtagagatttg agcagttcacctgtagcagctctctgtctggaggcactgtactatgtctgtgaggcggag atgatagacataatgtctgcatggaaagtgttagagtcacaactcataactgacacaaga gttgttgtgatggtaaagacatgtgaactgttgtcattggtacccagcttgcaagttaaa actgctgaatatgaggatttcctatctgagagtgtccgtagattatggttactaacacag tgtgatgtagaaatggtgaaatctgcagctttttctgctctgtccaaatacagtcaggag cactttaaaatatcccactttaaataccagatcgtgaaagagtttgtggagcaaggggag gcaatccttgcagcaagtgagaatgagggagatacaattgatacagttataccatcggtt cctggcatctgctacactagactgctctcagaattacatggtttaactctgacaggtttt cttgactttttatcagctatggtagggaaagaagctgagaatctcccacggggcatctac ttcacgtcactacggcaacaagggtctttatcaaatcagagcaaggaattgactgcaatt cctaattttgtccaatcacagtatgacaaaaataaacaacctggtttaagggcaagtctt gcagttgctctgctgttcacatatgatccaaagatagaagtaggacgtgatggaagacca aggaagcactacatgctatcccatggcaagaattatcaacaagtgtttaatacgttactt caagatgtaccagtacaaccctcagattggtaccgtacatctctcatgggacaggcttgg actgcctttgttgacagacttttctcagcaatgttacaggcaaggaaagcagagatagat cttcagttaaatagagattttattgatgagaaagaggctgaagaaaagaagttgtcagct tggttctgggtacgagacagcattatggacatgattaagaagtcaaccaggggcaatcca tcagttcagttcaacgctgttcttgccctgtccggtttggctcggagcgttcacaggtac atatcaagtttggatagtgaagagaggaagagaatggatgatgtcacggagcacacaagt cattctcattggctagtcattatgattgacagctgtatgtcactgattgatttcacgtac atgccaaaatctacattgttcggattatgtcagcagcgttctgtagatgacagacttcca gccagcattttagctcaggcggcaggaattttggctctttgccaaatagcatctcttatt atgaataattacatagagcttgtttatcaacttctggacatgttaatacaatggttacca gggaaacagtcagatgatgactgtccaccagttttacatttcttccgctctttgggtctc ggagtattccttgatcaactgatatcttcaaatttcacagaaattgcaggttccaaaggc agtttggcagtatggaaagctttagacaaacttgaagagtgttgtctgtctgactctgaa cacaggactggggcattgttgggtctctctgtaagtctgggtacactttgtcaagatggt aaaaccgaatcaagagtgcatatttcagcaatacatgccaaactaaaagatgcattaaaa caagcaccaagagaacattcaaattttcaagtgttatgcacatgtataggtttagtgact ggaactggttttgtttcaaacatcttggataagtcttgttttgatgaaaccctagccatt atacaggatcttactgacactaatacacagggtgcaggaatttgtttagcccttggaagt ttatgttttgctggagagattggagggcacccagaaatttctcaactgaaacagaaactg atatctgactggaaaacaacattgaccaaagcagacggcacagagttagagagagtagcc tccctttatggtctggtgtcggtaatgggatataatggattgtatggaaatgatgatacc aaatcattatctacttcaagagctggcattgatactgtcataaaaagcatcaaagaccta gtgacctcttgtgaccttgttggtatccaggcaacagctggctggttgctaggcactata tacatgtcagcttcaagcactaattacagctcatcagtatctgcaccgggcacatacagc tatctacaggaaaacagtattctacgggcagtggttgacttcctaattcaagcaggaaaa caaggtcctgaatttattccaagtaaacaagttgaagcctgccttgtaagtctgcaaagg gaagtaactgcaactttaccaccacttaattggatggggattttgtctcccttaatgaaa ttgcaatttgatgaggagataaagttactatgtatcaagttagctgtgaagttaagcagt tcttcatcatctgccgctctatttttagctgcatggattgtaccgccactcttcaacaca cttccggtaaaattccagtgtttgctgttatcctctgctggacattatgtcaaaactgtt acccctgacgtcctgaaatcatttttggacaaatgctgtagaccagtttttgcaacatcg tctgctgaaacaggaagtaaagaagggagagcactcaaaattgcagtattaaagggactt cactcttcccttgctgttcatgacccaccagaatcagtaacagcaatgttgtatgatatg gttgagtttgtttaccaacatactggtagtgaatctgacgttgatgtattgataaatctg gctgaatgtttacgtaatataccagactccctgcttgataaaataacaactggagactgt acctgcaaggactctgtgacacgagggacattcatacgtagtttccttgttgctaatggt aaccagcccatcacactactaaacagctgtatagatgctacctttaatactgaatgtgac agagacaaagttttgagtatcttagttcacagtttccaacgtatgatgatgttagaagga acgaaaaaaccaactttacaatgtgtacaatggctacatgaaattactggccattgtcga aacattgccatgggaacgtttaaactgacagcagaagatgctgatataagcaaggcaaca caatttgctgtcaatataatagctgcagctgtgtgtttgtggacctcaaggtcatctgta gcttccctgcttaacatcaactttgaccttttaactgtgccaacatcgggctgtgaggag ggcagtgattggctggaaaagtgctttgagcatgacgacggaagaattgattggtccact ggtatcaaaccattaaattgtatgcaagcgtacatacagaatttaacatcagagccatgg aatcaaattttgcagaaaattgtcgactggcatgttgctatgtttgaaacagcagaagac atagtatcaaaggacatgaagagaaagcttatggaatgcctcttctgtttgcgacattgt gcagaattcaagaagttaactacatggacaaaagcagtgatgtttacagtctaa

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