Ruditapes philippinarum (Manila clam): 132715509
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Entry
132715509 CDS
T09557
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132715509
03036 Chromosome and associated proteins [BR:
rphi03036
]
132715509
Transcription factors [BR:
rphi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
132715509
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
132715509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
Motif
Other DBs
NCBI-GeneID:
132715509
NCBI-ProteinID:
XP_060554497
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSSDYQEYPDVVQEVRGALNPGRLKFQGNSIVFKNTKTGRVDQFQGTDIDEVKWLKRARG
YCLKIVLHSGHIHRFDGFKETDQDKLGSFISRNYNTKLEPVDLSVKGWNWGQAKFEGNGL
NFMIDNNLAFELPLNNVSTTTTAKNEITLEFHQNDDAAVSLMEIRFHIPGDPANQEVDTV
QEFQNKVMENAEIIQATGDAVCVLPEVQCLTPRGRYDIKMYTTFFQLHGKTFNYNVPYTS
VLRLFLLPHKDGRQIFFVVSLDPPIKQGQTRYHFLILLFYKDDEMTLECGLGDQLEERYE
GKLQKEMNGPEYEIVSKVFKAVTTRKITVPGSFLGHSGTPAIGCSYKAATGLLYPLERGF
IFVHKPPVHIRFDELAAVNFARSAGSTRSFDFDVETKAGNVYTFSNIEKDEYGKLFEFAK
NKNLRMKNIGNKKSGVNNYDAMMDSDDEDGGHDAYLERMKAEGKDRDSDALDDDSDSSDE
DFRPEDSASDVAEEYDSNPMTTSDSDEEGSGSGGEQDEEKKAEKRKEKERRKQEKMEKRE
KSKSSKTVKEPFEEKAKEAKEEYDIAIKEYNKKLKEEGPPKSSSPSEKKSKSKSKSSPKK
PAVESKAGAGGSYKSKEFISESESSSDESEDEDDKPLKKKQKTSKKEKKEKMEVEESGSE
SEGEKPTGVKRRSQRKEGEESDVGSLPDEEEILSSPDHSDPGEAASESESGSGSASE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgactatcaagaatatccagatgttgtacaggaagtgagaggagctttaaat
ccaggtcgtttaaagtttcaagggaacagtatagtgtttaaaaatacaaagaccggaagg
gttgatcagtttcaaggaactgatatagatgaggtgaagtggttgaagagagcaaggggt
tactgtctcaaaattgtcttacacagtggacatatacacagatttgatggctttaaagaa
acagatcaggacaaactgggatcatttatttcacgtaattacaatacgaagctggaacct
gttgatctttcagttaaaggatggaactggggacaggctaaatttgaaggtaatggtttg
aattttatgattgacaataacttggcatttgagcttccactgaacaatgtatctacaaca
acaacagccaaaaatgagatcacgctagagtttcatcaaaatgacgatgccgcggtctct
ctaatggagatacgatttcatattcctggtgatccagctaaccaagaagtagatacagtt
caagaatttcagaacaaagttatggagaatgctgagattatacaggcaacaggtgatgca
gtctgtgttctccctgaggtacaatgtctcacacccaggggtcgttatgacatcaagatg
tacacaacatttttccagcttcatggtaaaacatttaactacaatgttccatacacttct
gtcttacgcttatttctacttcctcataaagatggcagacagatcttttttgtggtgagt
ttagatccaccaataaaacaaggtcagacaagataccattttctgatattattattctat
aaagatgatgagatgacactggaatgtggactaggagatcaattagaagaaagatatgaa
ggaaaattacaaaaggaaatgaatggaccagagtatgaaatagttagtaaagtgttcaaa
gctgtaactactagaaaaatcacagttccaggaagttttctagggcactcgggtacccca
gcaataggttgttcatataaagcagctacaggtctcctttacccacttgagagaggtttc
attttcgtgcacaaacctcccgtgcatatcagatttgacgagttagcagctgtcaacttt
gccagaagtgctggaagtacgagatcttttgattttgacgttgaaactaaagctggaaat
gtttataccttctcaaacattgaaaaggatgagtatggaaaactatttgagtttgcaaag
aataaaaatctgagaatgaaaaatattggtaataaaaagagtggtgttaacaattatgat
gcgatgatggacagtgatgatgaggatggaggacatgatgcctatctggagagaatgaaa
gctgaaggaaaagacagggatagtgatgctcttgatgatgatagtgattcttcagatgaa
gatttccgacctgaggattcagctagtgatgttgctgaggagtatgacagtaatcctatg
actacctcagactctgatgaagaaggtagtggctctggtggtgaacaagatgaagaaaag
aaggcagagaagaggaaagaaaaggaaaggagaaaacaagaaaaaatggagaagagagaa
aaatctaaatcttctaaaactgtgaaagaaccatttgaagagaaagcaaaggaggccaaa
gaagaatatgatattgctattaaggagtacaataaaaaacttaaagaagaaggacctcca
aaatctagcagtccaagtgagaaaaagtcaaagtcgaaatcaaaatccagtccgaagaag
ccagctgtagaatctaaggcaggagctggtggttcatataaaagtaaggaattcatttcg
gagagtgagtcatcatctgacgagtctgaagatgaggatgataaacctctcaaaaagaaa
cagaaaacaagtaagaaagagaagaaggagaaaatggaggtagaagaatctggttcagaa
tcggagggagaaaaaccaacaggtgtgaaacgtagatctcagaggaaagaaggggaggaa
tctgatgttggttcattaccagatgaagaagaaatattaagttccccggatcactcggat
cctggtgaggctgcctccgagtccgagtctggatcaggttccgcatcagaataa
DBGET
integrated database retrieval system