Ruditapes philippinarum (Manila clam): 132715577
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Entry
132715577 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit alpha-1-B-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132715577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132715577
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132715577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
132715577
NCBI-ProteinID:
XP_060554570
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MTGLNFLQHIVLAIVLTSFIICRAANITDQNQLYDDLQQSYNKDIRPEETNVIQVVNFSL
SLVSINRFDELNGELDMTSMITMSWVDSRLVWDSSKYGGLTSMMFPPSKIWTPQVYILNA
YDLFEVENEQYVRVTSDGVVTWKPAQLLYLLCSVYVLYFPFDVQKCKIDFSAWAFSKDEM
ILNSDRNEIAFDYYHRNRLWQISKHTISYPPRGNNSVLRFDVYIERRDTFMIVYVIIPVF
LVGSLNCFVFLIPASAGERTSVAVTAFLAFVVFMTMVNGIVPASSDPVAYLFFYMLFLLA
YSGAIMIMSILSLQIYEREGNIPSFIRKAFICRKKKGEVAPLENVTPVKEMKLSDTDQDD
EDDSDAQEVTWKDVGLAFDRFCFISLLITYMIYSCIVYAQVTTDVEADGHV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgactgggttgaacttcttgcagcatattgttctggctattgttttaaccagtttcatt
atatgcagagctgcaaacattacagatcagaatcaactgtacgatgacttacagcaaagt
tataataaagacatccgacctgaggaaacaaatgtcatacaggtagtgaatttttcactt
tccttagtgagcatcaaccggttcgacgagctcaatggcgagcttgacatgacgtctatg
ataacgatgagctgggttgacagccgtttagtctgggacagctccaagtatggcggtctt
acctcgatgatgttcccgccaagcaaaatatggacgccacaagtttacatcctgaatgct
tacgatttatttgaagttgaaaacgagcagtatgttcgtgtgacgtcggatggggttgtc
acgtggaaaccggctcaacttttgtaccttctgtgctccgtgtatgttctgtactttccg
ttcgacgtccagaaatgcaaaattgatttttcagcatgggctttctctaaggatgaaatg
attttgaattctgatcgaaatgaaattgcctttgactattaccatcgcaacagattatgg
caaatctcaaaacacactatttcttacccacctcgtggcaacaattctgtacttcgtttc
gacgtctacatcgagaggcgtgacacattcatgatcgtctacgtgatcatcccggtcttt
ctcgtcggttcattaaattgtttcgttttcctgataccagcgtccgcaggagaaagaact
tccgttgcagttacagcgttccttgcgttcgtcgtttttatgacgatggttaacggaata
gttccggcaagttccgatcctgtagcctacctattcttttatatgctgttcctccttgca
tacagtggagcaattatgatcatgagcatattgtctttgcagatctacgagagggaaggc
aacattccgtcttttataagaaaggctttcatttgtaggaaaaagaaaggggaagttgca
ccattagaaaatgttaccccggtaaaagaaatgaaactatccgacacagaccaagacgat
gaagacgacagtgacgcacaggaagtgacgtggaaagatgtcggacttgcatttgataga
ttttgtttcatttctttacttataacttacatgatatattcatgtattgtttatgcacaa
gtgaccactgacgttgaggccgatggtcacgtgtaa
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