Ruditapes philippinarum (Manila clam): 132715598
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Entry
132715598 CDS
T09557
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132715598
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132715598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
132715598
NCBI-ProteinID:
XP_060554597
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MPPRRNNRRQTTKDNVISPTQEKEAKSPVKTKAEVKEMPTMDTAESLAMKEEMITEVKKE
EEPSFEHLSAEEALRRAVLNEEAAFEKATAIIEQAKIEVDGDVHMGDAGNERGVETGEDG
NPNLPEISYKNPTMLLNEKRKGLTFELVSDTGEGPNKVWTYSVELEGQKFDGTGRSKKVA
KQEAAKYALIKMFNILCVPEEQPAIPNESEVTDKGEGDADMQGKKRPFPGPQGKNAKRLK
AQAQPKNALMHLYELKPGIQYTVVSQTGPTHAPVFTMSVEVNNQVFTGQGNSKKAAKLSA
AEQALKSFVQFPNASDAHAALGRQPQMNVDFTSDNPEVFIQNFEGADGIDKSIAQSQSQN
GNGLGVNAGKKSKALQHHEGKNPIMILNELKPNLKYECMSETGDKHSKTFTMAVTVDGET
FTGTAKNKKLAKARAAQAALAKIYNLTFSWGPGAMPVNNTESGEPPSALADHVAKLVQGK
FAELTDDLKSQYARRKVLAGMVMTRGEDLSQSKVLCVSAGTKCINGEYLSTSGLSVNDFH
AEILARRSTIRFLYSQLEKMASNDPYQIEDSVFEMCEKGCKLKDDVKFHLYISTAPCGDS
RIFSPHEIQQGSENEGGDKHPNRKARGQLRTKIESGEGTIPVRMAVGVQTWDGVIQGERL
LTMSCSDKIARWNLLGIQGALLGHYIQPVYIESIILGSLYHNEHLARAVYGRLANMEGIT
KPYCINKPNLSGINNPEQRQLGKAPNFAVNWCDGDEGLEVINMTTGKLEQGTESRLCKRE
MLKRFYALQGRISTVTDLAKIPNISYGELKAMNVQYQEMRNKLVEHFKKSGYGQWVKKPV
EQDEFLYSTDQRA
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaggagaaataatagaagacaaacaacgaaggataatgtaatatcccctaca
caagagaaagaagcaaaaagtccagtaaagactaaggcagaggtaaaagaaatgcccaca
atggacacagcagagagtttggcaatgaaggaagaaatgattaccgaagtaaagaaagaa
gaagaaccgagttttgaacatctttctgcagaagaagcattgaggagggctgttttgaat
gaagaagcagcatttgagaaagccacagctattatagagcaagcaaagatagaagtagat
ggggatgtccacatgggcgatgctggaaacgaaagaggtgttgaaactggagaagatggt
aacccaaatctaccagaaatatcctacaagaacccaacaatgcttcttaatgaaaagaga
aaaggtttgacgtttgagcttgtatctgacactggagagggccctaacaaggtatggaca
tacagtgttgagctggaaggacaaaagtttgatgggactggacgtagtaagaaagtagca
aaacaagaagctgcaaaatatgctcttataaagatgttcaacatcttatgtgtgccagaa
gagcagcctgcaattccaaatgaatcagaagtgacagacaaaggtgaaggggacgccgat
atgcaggggaaaaaacggccctttcctgggccccagggcaagaatgctaaacgactcaaa
gctcaagctcagccaaagaatgcattgatgcatctgtatgaattgaaaccaggtattcag
tatactgtggtttcacagaccggcccaactcatgctccagtatttaccatgtcagttgaa
gtaaataatcaagttttcactggacaaggaaattctaagaaagcagccaagttatctgct
gcggagcaggcactcaaatcatttgtacagtttccaaatgcttctgatgctcacgcagcc
cttggacgtcagcctcagatgaatgttgactttacttctgataatcctgaagtgtttatt
cagaattttgaaggtgcagatggtatagataaatcaattgctcaatcacagtcccagaat
ggtaatggtcttggtgtgaatgctgggaaaaaatctaaagctctacaacatcatgagggc
aagaaccctataatgatcctcaatgaactcaaaccaaacctcaagtatgagtgtatgtca
gaaactggtgataaacattctaaaacattcacaatggccgtgactgttgatggggaaaca
tttactggaacagccaaaaacaaaaagctggcgaaggcaagagcggcccaagctgctcta
gctaaaatctacaatcttacattctcatggggacctggagctatgcctgttaacaacaca
gagagtggagaaccaccttcagcattagcagaccatgttgccaagttagtacagggcaag
tttgctgaacttactgatgacttgaagagtcagtatgcacggagaaaagtgcttgctggt
atggtgatgacacgtggtgaggacctgtcacagtcaaaggtgctatgtgtatcagcggga
acaaaatgtataaatggcgagtacctcagcactagcgggttaagtgtaaatgactttcat
gctgaaattttagcacgcagatcaactataagatttctgtattctcaactggaaaaaatg
gcttccaatgacccttatcagatagaagactctgtgtttgagatgtgtgagaaaggttgt
aagcttaaagatgatgtaaaattccacttgtacatcagtactgcaccatgtggtgattcc
agaatattttctccacatgagattcagcaaggaagtgagaatgaagggggagataaacat
cctaatagaaaggccagaggtcagcttcgaacaaagatagagtctggagaggggacgatt
cctgtcagaatggcagttggtgtgcagacctgggatggagtcatacaaggagaaaggctg
ttaactatgtcctgcagtgataaaattgctcgttggaaccttcttggcattcaaggtgcc
ttgctgggccactacattcagcctgtgtatatagagagcatcattctgggctctttatac
cacaacgaacatctagcacgagctgtgtacggacgtctggcaaacatggaaggtattact
aagccttactgcatcaataaacccaacctcagtggaatcaacaatcctgagcaaaggcaa
cttggcaaagccccaaactttgctgtcaactggtgtgatggagatgagggccttgaggtg
atcaacatgactaccggaaagttggaacaaggaacagaatccaggctttgtaaacgagaa
atgttgaaacgtttctatgcattacaaggcagaatatcaactgttactgacttggctaaa
attccaaatatatcttatggagagctcaaagcaatgaacgttcaatatcaggagatgcga
aataaactcgtggaacattttaagaagtctggttatggccaatgggtgaaaaagcctgtt
gaacaggatgagttcttgtattctacagaccaaagagcataa
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