Ruditapes philippinarum (Manila clam): 132715751
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Entry
132715751 CDS
T09557
Name
(RefSeq) RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132715751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132715751
Spliceosome [BR:
rphi03041
]
Complex A
U1 snRNP components
U1 related factors
132715751
Complex B
132715751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PWI
Motif
Other DBs
NCBI-GeneID:
132715751
NCBI-ProteinID:
XP_060554796
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSFPPRPPVGMPPMTGMMSTGYTFTPMGMMPMGMQMMPPTTMIRPVVTNATATVVTRPKK
QLVPQEIDKDDKKEEKPPVTTVFVGNISERAPDSMVRTMLQRCGNVISWKRVQGASGKLQ
AFGFCEYEDPEATLRCMRLLNEWEIADKKLVVKVDAKTKTLLDDWKSKKKSEESKEEKEK
NGDKEEKAEEGEMKDDKDSLDEFTLREDRVAKAGLDAIMREYAFELAKEPTTAKTVHEPV
SEIPKVPMPPIKQKDASQLRDTGLDDLNMEADTKDLINREIQSFRNLHKDIEDAEAEKER
EREREREFTREKERRMAEERRRKEKEREAQRVKELELYEERRKASKRRESRSRSRSRSSS
RGRSSRRSRSRERERERERDRRARDRELEEEEEAYERRKMEKKIREKEIAYQERLKNWEA
RERKKAREYEKEREREDERKAEEGREARRLREFLEDYDDERDDPKFYKGSALERRLRERQ
KEKEVDSRDRAKEKEELEDIRRKLLEEGHPDLEAEMAKIEREREEHLRPMLQINDNIAPH
SPSESSSEDEHPASPPRQESEEESHEKFPALPNMKPTLQPVDESSQSASEVYADDEASRM
SIGHSEDSQQPMYGPNARDDSRLGFGAMKFSANVSGPNSPVEQTSGKRKKLTVGDVFNQD
DDDSLDGSKKRKLVPLDYGDSGDDSASGLEGKKATSAEEKRAKIKTLIENIPTAKDELFA
FQLDWRIVDQSLMDKRIKPWVNKKIIEYIGEEEPTLTDFICQKVMAQSPPQNILNDVAMV
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccaccaagaccaccagtgggtatgccaccaatgactggcatgatgtctaca
ggatacacatttacacccatgggtatgatgccaatgggaatgcaaatgatgccaccaaca
acaatgatcagacctgtagtaacaaatgcaacagcaactgtggtgacaagaccgaagaaa
cagcttgtacctcaagaaatagataaagatgataagaaggaagagaaaccgccagtaaca
acagtatttgtaggtaatataagtgaacgtgcaccagattccatggtcagaacaatgtta
cagcgttgtggaaatgttatcagttggaaaagagtgcagggtgcctcaggaaaattgcag
gcatttggcttttgcgagtatgaagatccagaagccactcttagatgtatgagattatta
aatgaatgggaaatagcagacaagaaactagtagttaaagttgatgcaaaaacaaaaact
ctactagatgactggaaaagtaaaaagaaaagtgaggagtctaaagaggaaaaggaaaag
aatggtgataaagaagagaaagcagaagaaggggagatgaaagatgacaaagattcactt
gatgagtttaccctgagagaagacagagttgctaaagctggccttgatgcaatcatgcga
gaatatgcttttgaactagccaaagagcctacaactgccaagacagttcatgaaccagtt
agtgaaatccctaaagttccaatgcctccaattaaacagaaggatgcttcgcaacttcga
gatacgggtttagatgatttgaatatggaggcagacaccaaggatctgatcaatcgtgaa
atccaatcatttagaaatcttcataaggacattgaggatgctgaagcagaaaaagaaaga
gagagagaacgagaaagagaatttactagagagaaagagcggcgtatggctgaagaacga
cggaggaaagaaaaggaacgagaagcccagcgggtcaaagaactggaactgtatgaagag
agaaggaaagccagcaagagaagggagagtagaagcaggtcaaggtcgaggtcaagttct
cgtgggaggtcatccagaaggtcaaggtctagagaaagagagagagaaagggaaagggac
agaagggctagagatagagagctagaagaagaggaggaggcttatgagagaagaaaaatg
gaaaagaaaatcagagaaaaagaaatagcctatcaagagagattgaaaaactgggaggcc
agagaaaggaagaaggctagagaatatgaaaaagagagggagagagaagatgaaaggaaa
gcagaagaagggcgtgaagctaggcggttacgagagtttcttgaggattatgatgatgaa
agagatgatccaaaattttacaagggcagtgcactagagcgtagattaagggaaaggcaa
aaggaaaaagaggttgattctagggatagagcaaaggagaaagaagagttagaagatatt
agaagaaagttgctagaggaaggtcatccagatcttgaagctgaaatggcaaagattgaa
agagagcgagaggagcatttacgtcctatgttacaaatcaatgacaacatcgccccacat
tccccatcagaaagctctagtgaagatgagcaccctgctagtccgcctagacaggaatct
gaagaggagagtcatgaaaagtttccagctttaccgaacatgaaaccaacccttcagcca
gtagacgagtcatcacagtcagccagcgaagtttatgctgatgatgaggcatcaaggatg
agtataggtcacagtgaagatagccagcaaccaatgtatggaccaaatgcccgtgatgat
tccagacttggctttggtgctatgaagtttagtgcaaatgtatccggtccaaactcccca
gtagagcaaacgtctggtaagagaaagaagctgacagtaggtgatgtatttaatcaggat
gatgatgattctctagatgggtctaagaaacgtaaacttgtaccacttgattacggagat
agtggtgatgatagtgctagtggcctagaggggaaaaaagccacaagtgcagaagagaaa
cgtgccaagataaaaacattaatagaaaatattccaactgccaaagatgaattatttgca
ttccagctggactggaggatagttgatcagagtttaatggataagcgtattaagccatgg
gttaacaaaaagattatagaatatataggagaggaggaaccaacgttaacagactttata
tgtcagaaggtgatggcacaaagtccaccacaaaatatactcaatgatgtagctatggta
agttga
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