Ruditapes philippinarum (Manila clam): 132715835
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Entry
132715835 CDS
T09557
Name
(RefSeq) F-box only protein 39-like
KO
K10314
F-box protein 39
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132715835
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132715835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
DUF5750
Cullin
Motif
Other DBs
NCBI-GeneID:
132715835
NCBI-ProteinID:
XP_060554901
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MAAPISWNGIPDIALILIYSSLPDQDRLNIACTCKNWNRLFSSAKLWRHRRVVFNAKSSE
ETAEREIKFLEKFGHCLYRLTLNLGRPTFKSCLTISRSVEKYLNRICSRNDIQIRDLDLE
SLHMEQHWHFILSRGRVVSALSKMIRKQKFLECVYMAGTRMRLIDGCRILEALAKGRTKN
TVKTLYMEDFFETNMFPFRTQRYVNAMAKFLALEELHINYRYLSSEMLRNIANTLPKHLV
NLSLVLEGDIRGIEIRSDAWMEFSEKCPLATVGAYLCTTILRGNDLRTAFVRGLPLNQIY
LTSWARVDETEQRLSIFLRHLGNMYNITLENFAMFFEHHEHIDYDLLFLLRKCRRIKDLC
IQARLSADTVINIMKLQHQGKLALTSINLTIPGLSSDDWHRIDQEKERLLTNVVEYVHVG
PNEFGSSIGGSTITIDDEGQADDFQNGGDDADILNFHNIIDVNVEISDDENDIFQPPDPG
HEDDDEFLI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatttcttggaatggcatacccgatattgctctaattttgatttattca
agtcttccggaccaagataggctaaatattgcatgcacctgtaaaaactggaacaggtta
ttttcttctgcaaaattatggcgtcacagacgtgttgttttcaacgcaaaatcatcggag
gagacggcagaaagggagattaaattccttgaaaagtttggacattgtctgtacagactg
actttaaatctaggaagaccaacatttaagtcatgtttaacaatatcaagatcagtagaa
aaatacttgaaccgaatctgtagtcgaaatgacatccaaattcgcgacttggacctagaa
agtttgcacatggaacaacactggcatttcattttgtccagaggtagggtagtttcagca
ttaagcaaaatgattcggaaacaaaaattcttagaatgtgtgtatatggccggtacaaga
atgagactaattgacggttgtaggatcttagaggctcttgcaaaaggcagaactaaaaac
acagtcaagacgttgtatatggaggacttttttgaaacaaatatgtttccatttcgtaca
caaagatacgtgaatgcaatggctaaattcctggcattagaagagcttcatattaattac
agatatttgagcagtgaaatgttaaggaatattgctaacacactacctaagcatttggta
aacctttctcttgttttggaaggggacattagaggaatcgaaattcgatcagacgcttgg
atggagttttcagaaaagtgcccgctggcgactgtaggagcttatctttgtacaacgatt
ttaagaggaaatgatttgaggaccgcttttgttagagggctgccattaaaccagatatat
ttaacttcgtgggcaagagtagatgaaacggaacaaagactttcaatatttctgagacat
cttggaaacatgtacaacattactctagagaattttgctatgttctttgaacatcatgag
catatagattacgacctgctatttttgttgcgaaaatgtcgacgaatcaaagatctgtgt
atccaagcacgattgtcggcggatacagtgatcaatatcatgaagcttcagcatcaagga
aaactcgcactgacgtcaataaacttaactattccgggtctatcaagtgacgactggcac
agaattgaccaagaaaaagaacgtctgcttacaaacgtggtggaatacgtgcacgtcggc
ccgaatgagttcggttcaagcattggtggaagcacaatcactattgatgacgagggtcaa
gcagacgattttcaaaatggcggtgatgacgcagacatcttgaattttcacaacatcatt
gatgtcaatgttgaaatatcagatgacgagaatgatatattccaaccaccggaccccggt
catgaagacgatgacgagtttttgatttga
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