Ruditapes philippinarum (Manila clam): 132715847
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Entry
132715847 CDS
T09557
Name
(RefSeq) POU domain, class 6, transcription factor 1-like
KO
K09368
POU domain transcription factor, class 6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132715847
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
132715847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
HTH_72
HOCHOB
Motif
Other DBs
NCBI-GeneID:
132715847
NCBI-ProteinID:
XP_060554910
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDADSNDGTVTESLNGETKPDVAKLAQSAIIKQVRETLSSVFVIFSCLASILFLLVIRKL
MDNLSFKRFLEGVKGAISSLSSPSQLFGQPQVAPPQFFLTGNPLQSQTGASGSVPVQQLL
IPVSTGIYPPQFISIPVSMATGGNQQIQLLTTSNGQIVATNLANLAGLSNPLSASLANSV
NNLASQSLLQNSSSHHSSATQALTNHLAAVAPSLLAAGAQSQLLAGLGQQLLSQVSLAQS
NGTNSLSQSSQVSNSSASQTQAVLNSLQQTLSAASAGQNGITVQPASTRILTQNLNNTAS
SLNSSNTTTQLLGKISEIGASGHTNTAVNLANQILATRVTSTQLINHVPSSLEGLMPNTV
GNSTESTTVDGINLDEIKEFAKQFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRFEK
LDITPKSAQKIKPVLERWMLEAEERYKNGMQNLTEFIGSEPSKKRKRRTSFTPQALELLN
KFFERNTHPSGAEMTELADKLNYDREVIRVWFCNKRQALKNTIKKLKQEGP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgattctaatgatggaactgtgacagagtccctgaacggtgagaccaagcct
gatgttgccaaacttgcacaatctgccatcatcaaacaggttcgtgaaactttatcttcc
gtttttgttatattttcctgcttagcctccatcttgtttctgctagttattaggaaattg
atggacaacttgtcttttaagaggtttcttgagggagtaaaaggagcaatatcatcatta
tcaagtccttcccagctgtttggtcaaccacaagtggcgccacctcagttttttctcacc
ggaaatcccctccagtcacaaaccggagcatctggatcagttccagttcaacaacttctc
atcccagtctccacaggtatttatcccccgcagtttatcagcattccagtttctatggca
actggtgggaaccagcagatacagttgttgacaacatcaaatgggcagatagttgcaaca
aatcttgccaacctagcaggtctatctaatccacttagtgctagtcttgctaactcagta
aacaatttggctagccaatcattgctacagaattcatcctcccatcattcctcagcaaca
caagcattgaccaatcatcttgcagcagtggctccctctttgttagctgctggtgcccag
agtcaacttctagccggtcttggccaacagcttttatcacaagtatcgttagctcaatca
aatgggacaaactcactttcacagtctagtcaggtatctaactcatcggccagccagact
caggctgtcctaaactccttacagcaaacattgtcggctgcgagtgcaggtcagaatggt
atcacagttcaaccggcatcaacacgtattttaacacagaatctcaacaacacagcttct
tcattaaactcatccaacacgacaactcagttacttgggaagatttcagaaatcggggca
tcaggtcataccaacacggctgtaaatttagccaatcagatattagcaactcgtgtaacg
tcaacacagcttattaatcatgtgccatcttcattagaaggattgatgccaaatactgtg
ggtaattcaactgagagtacaacagtggatggtataaaccttgatgagataaaagagttt
gcaaaacaatttaaaatccggagattatctcttggcctcactcagactcaggtggggcaa
gctttaagtgcaacagagggaccagcctattcccagtccgccatttgtcgatttgaaaaa
ttggacatcactccaaagagtgcacaaaagattaagccggtgttagaaagatggatgctg
gaggctgaggagagatacaaaaatgggatgcaaaaccttactgaatttattggcagcgag
ccatcaaagaaacgtaaaaggcgtacatcatttacaccccaagctttggaactgctgaac
aaattttttgaaagaaatactcatccatcaggtgcagaaatgacagaattagcagacaag
ttaaattatgacagagaagttatcagagtttggttctgtaataaaagacaagctttgaaa
aataccattaaaaagctgaagcaagaagggccatga
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