| Entry |
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| Name |
(RefSeq) DNA mismatch repair protein Msh2-like
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| KO |
| K08735 | DNA mismatch repair protein MSH2 |
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| Organism |
rphi Ruditapes philippinarum (Manila clam)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rphi00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132715862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rphi03400]
132715862
DNA repair and recombination proteins [BR:rphi03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132715862
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
785 aa
MNFESFVRDLLLVKQYRVEVYKNKGGAKNNEWSLGFKASPGNLTQFEEILFGNTDMSNSV
GVIAVKLSSENGQRMLGVGYADATLRKFQVSEFTDNDQFSNLEALIVQLGPKECVLAPGD
STADTGKLKQVLDRSGVLITERKRSEFTNKDAVQDLNRLLKMKKGEQGNAASLAEVDKQH
AMAALSAIIKYLELLSDESNFGQFTLSTFDLGQYMRLDAAAVRALNLLPSSTEGGNKNQC
LLGLLNRCRTAQGQRLLGHWVKQPLVDKNRIEERLNIVEAFVEDTELRQMLFEDQLRRIP
DFQRLAKKFQRKKASLQDVYRVYQAIDKMPYLLETLEKTDSQHKSLLMDIFSNPLKELLM
DFAKFQEMVEATMDLDQVENHEFVIKADFDEGLTALKEKMDKLEDNIKGQLNKVARDLGL
EPNKVLKLESNAQLGYFFRVTLKEEKVLRNNKNYITIDTKTNGVRFHNKAVRELNTDYLE
AKEEYGEQQKSVVNEVIGIAAGYVEPMLIINDILAQLDVLVSFSQVTTCAPIPYVRPTVL
EKGSGIIKLKETRHPCLEMQDDIAFIPNDIQFEKDKQMFHIITGPNMGGKSTYIRSIGVT
VLMCQLGCFVPCNEAEVTIVDSILARVGAGDSQLKGVSTFMAEMLETASILRSATEDSLI
IIDELGRGTSTYDGFGLAWAISENIATQLKSYCLFATHFHELTALADKVPTVNNLHVTAL
TSNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVIQFAKEKACELEDYQCISLSGTDLE
GEDEP |
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| NT seq |
2355 nt +upstreamnt +downstreamnt
atgaattttgagtcttttgtacgagacctacttctggtgaaacagtacagagtggaggtg
tacaagaacaagggtggagctaaaaataatgagtggagtcttggatttaaggcatctcca
ggcaacctgacacagtttgaggagatactgtttggaaacactgacatgtcaaactctgtt
ggggttattgctgtaaaattatcatccgagaatgggcaaaggatgctaggagttggttat
gcagatgctacattgaggaaatttcaagttagtgaattcacggataatgaccagttttca
aatctagaggcattgattgtacaactaggaccgaaggagtgtgtcctggcccccggggat
tccacagcggatactggtaaacttaaacaagtccttgacaggagtggtgttcttattaca
gagaggaagagaagtgaatttacaaacaaagatgctgtccaagatctgaatcgtctgctg
aaaatgaagaaaggtgaacaaggaaatgctgcatctttagctgaagtggacaaacagcat
gccatggcagccttgtcagcaattatcaaataccttgaacttctatcggatgagagtaat
tttggtcagtttacattgtcgacctttgaccttggtcagtatatgagacttgatgctgcc
gctgttcgagccctgaatctactccctagctctactgaaggaggcaacaagaatcagtgt
ctacttggtcttctaaatagatgtcgcactgcacaaggtcaaaggttactaggtcactgg
gtcaaacaaccattggtggataaaaatagaatagaggagaggctaaacattgttgaggca
tttgttgaagatacagagcttagacagatgttgtttgaagatcaattaagaaggatacca
gatttccagagattagctaaaaaattccagaggaaaaaagcttcattacaggatgtgtac
agagtttatcaggcaatagataagatgccatatctactggaaacattagagaaaactgac
agtcagcataaatcactactcatggacattttcagcaatcctcttaaggagctgttaatg
gactttgccaagtttcaagagatggttgaagccaccatggatcttgatcaagttgagaac
cacgagtttgtcataaaagccgactttgatgagggtctgacagcgttaaaagaaaaaatg
gacaagttagaggacaatattaaaggtcaacttaacaaggttgccagggatcttggttta
gagcccaacaaagtgttgaagttagaaagcaatgctcagttaggatatttctttagagtg
accttaaaggaggagaaagttttaagaaacaacaagaattatatcaccatagatacaaag
accaatggtgtgaggttccataacaaggcagtgagagaacttaatacagattaccttgag
gcgaaggaagagtacggtgaacaacagaaaagtgtggtgaacgaggttattggaattgca
gctggatatgtagaacctatgttgataattaatgacatattggcacagttagatgtattg
gtgagtttctcccaggtgacaacatgtgctccaataccgtatgttagacctactgtactg
gaaaaaggtagtggtattataaaattgaaggaaacgagacacccatgtctagagatgcaa
gatgatatagcatttatacctaatgatatacagtttgaaaaagataaacagatgtttcac
attataactggaccgaacatgggagggaaatctacatacattcgctcaattggtgttact
gtgctgatgtgtcaactgggatgttttgtgccatgtaacgaggctgaggtcactatagtt
gacagtatacttgcaagagtgggtgctggggacagtcaactgaagggtgtgtccacattt
atggcagaaatgttagaaacagcttctatactgaggtcggcaacagaggattcattgatc
atcatagatgagttagggagaggcacatcaacatatgatggttttgggctggcatgggct
atctcagaaaatatagcgacacagttgaagtcttactgtctgtttgccacccacttccat
gagttaactgcccttgctgataaagtgcccactgtgaataatctacatgtaactgccttg
actagtaacgatacattaacgttgctgtacagagttaaaccaggtgtgtgtgaccagagt
tttggaatccatgtggcagaattggcacattttcctaaacatgttattcagtttgccaag
gagaaagcctgtgagttagaagattatcagtgcatcagtctgtcaggtacagaccttgaa
ggagaggatgaacca |
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