Ruditapes philippinarum (Manila clam): 132715979
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Entry
132715979 CDS
T09557
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132715979
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132715979
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132715979
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
132715979
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
132715979
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132715979
Prokaryotic type
132715979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
POR_N
Motif
Other DBs
NCBI-GeneID:
132715979
NCBI-ProteinID:
XP_060555080
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MAETSGKVKRTQPAWSPPEPKRKPAKLKLYNSLTRQKEEFVPQNGNQVLWYSCGPTVYDS
SHMGHARSYISFDILRRVMTDYFNFNITYCMNITDIDDKIIKRARQNHLWDNYIAENRPW
NTIIADNVKAMEPFKTKMEKEEDNDKLAMYQRMKVNIEAAITNMEALVNNKSEESRVAEA
KQELLLASKDVLSDWLDNQHGSEVTDKSIFSKLYQHFEQEYHEDMNSLNVLGADVLTRVS
DYVPEVVDFVQKVIDNGYGYESNGSIYFDTTAFSNAPSHYYAKLVPEAYGDMKALKEGEG
ELSISEDRMSEKRSNNDFALWKASKPGEPTWDSPWGKGRPGWHIECSVMASSILGESLDI
HTGGVDLKFPHHDNELAQAEAYFENDHWVRYFIHSGHLTIDGCKMSKSLKNFITIKAALE
THTARQLRLLFLLHSWKDTLDYGKDTMTGTIRYEKLISEFFHMLKDIKRNTPGVGVDAFD
KWGPEELSLNQKYSDTREEVHEALCDSIDTKRTCDAIKDLIKACNIYVPEIRNKRRPNRI
LLENIGAFILKIFKIFGAVQADEDWLTVSGGAATGTVDVEETVMPYLTVFANFREDIRKV
AREEKVTSVLKVCDNLRDEVLPNLGVRLEDKEGQPPVIKLVDRETLLREKEEKMKLEEAK
RKEKELKKQKAEKEKAEKEAQKRIPPSELFKNETDKYSKFDEKGLPTHDAEGKELSKSAL
KKNMKLYEAQEKKYKEFTEKSGN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacttcaggaaaggtgaagagaacgcagccagcctggtccccaccagagcca
aagaggaaaccagcaaaactgaagttgtacaacagtcttacaagacaaaaggaagaattt
gtgcctcagaatgggaaccaggtgctgtggtacagctgcggaccaactgtgtacgattcg
tcacatatggggcatgctcggtcttatatttcgtttgatattttacgacgggtgatgacg
gattacttcaactttaacataacatactgtatgaatattacagatattgatgacaagatt
atcaagcgtgcgagacagaaccatttatgggacaattatatcgcagaaaaccgaccttgg
aatacaattatagcagataatgtgaaggcaatggagccattcaaaacaaaaatggagaag
gaagaagataatgacaaacttgcaatgtaccagagaatgaaagttaacatagaagcagcc
atcactaacatggaggccttagtcaataacaagagtgaggaatctcgtgttgctgaagca
aaacaggaactgttacttgcctcaaaggatgtgctctctgattggttggacaatcagcat
gggtcagaggtcacggataaatctatcttctctaaactgtaccagcattttgaacaggaa
tatcatgaagacatgaacagtcttaatgtgctaggtgccgatgtattgactcgagtgagt
gattacgtgccagaagtggttgactttgtgcagaaagtcatcgacaatggctacgggtat
gagtccaatggttctatatattttgacacaactgcttttagcaatgcacccagtcattac
tacgcaaagctggtacccgaggcatatggtgatatgaaggctttgaaagagggagaaggt
gagttgagtatatcagaggataggatgagtgagaaaaggagtaacaatgattttgctctc
tggaaagctagcaaacctggggaaccaacctgggactctccatggggaaagggacgacca
ggttggcatatagaatgctctgtaatggccagcagtatacttggagaatcactagacatt
cacactggaggagtggatctcaaattccctcatcatgacaatgaattggcacaggcagag
gcatattttgaaaatgaccattgggtgcgatacttcattcactctggtcatctgacaatt
gacggatgcaaaatgtccaaatctctgaagaattttattaccatcaaagcagctttggag
acacacacagccaggcagctgagattgttattcttgcttcattcttggaaagatacattg
gactatggcaaggacaccatgactggcacaattagatatgagaagttgatctcggagttt
tttcacatgttaaaagacatcaaaagaaatacaccaggtgttggagtagacgcttttgat
aagtggggacctgaggaacttagtctgaaccaaaagtacagtgacaccagagaggaagta
catgaagccctatgtgattctatagacactaaaagaacatgtgatgcaataaaagattta
attaaagcctgcaatatatatgtccctgaaatccgaaataagaggagaccaaatcgaatt
ctactggaaaatattggagcattcatcctaaaaattttcaagatatttggagcagtacaa
gctgatgaagactggttaacagtttctggtggagcagctacaggaacggttgatgtagaa
gaaactgtgatgccatatttgactgtatttgccaacttcagggaggacataagaaaagtt
gcaagagaggaaaaagtgacatcagtattgaaagtgtgtgacaatctacgtgatgaagta
ttgccaaaccttggtgtgagattggaggacaaagaaggtcaacctccagttattaaactc
gttgatagagaaacactactcagagaaaaggaagagaaaatgaagcttgaagaagcgaag
cgaaaagaaaaagaactgaaaaagcagaaggcagagaaagaaaaggcagaaaaagaagcc
cagaagagaatacctccatcagaactcttcaagaatgagacagacaagtactcaaagttt
gatgaaaagggacttcccactcatgatgcagaaggaaaagaactttctaaatcagctctc
aagaaaaatatgaagttatacgaggctcaagaaaagaaatacaaggagttcacggagaag
tcaggaaactag
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