KEGG   Ruditapes philippinarum (Manila clam): 132715986
Entry
132715986         CDS       T09557                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03030  DNA replication
rphi03410  Base excision repair
rphi03420  Nucleotide excision repair
rphi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132715986
   03410 Base excision repair
    132715986
   03420 Nucleotide excision repair
    132715986
   03430 Mismatch repair
    132715986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rphi03032]
    132715986
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132715986
DNA replication proteins [BR:rphi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    132715986
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     132715986
   MMR (mismatch excision repair)
    Other MMR factors
     132715986
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    132715986
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9
Other DBs
NCBI-GeneID: 132715986
NCBI-ProteinID: XP_060555098
LinkDB
Position
Unknown
AA seq 260 aa
MFEARLVQGSLWKKIIDAIKDLLNEAKWDCNASGITLQAMDSSHVSLVSLNMRSEGFDTY
RCDRNLSMGINLGSMAKIIRCAGNDDVITLKTGDDADTVTFVFESPNNEKVSDYEIRLLD
IDAEHLGIPETEYSCVVKMPSGEFARICRDLSQIGESVVICCTKEGVKFSASGDLGTGNI
KLAQNCSSDKEEEAVIIEMTQAVTLTFALRYLNYFSKASPLSQQVTLSMSADVPLVVEYK
VADMGYLRYYLAPKMEDADD
NT seq 783 nt   +upstreamnt  +downstreamnt
atgtttgaggcaagattagtgcaaggttctttgtggaagaaaataatagatgccatcaaa
gatttgctgaacgaagcaaaatgggactgcaatgcaagtggaatcactttacaggctatg
gatagttctcatgtcagtttggtatcgttgaatatgcggagtgaaggatttgatacatac
agatgtgaccgaaatttatctatggggataaatttaggaagcatggcaaagattatcagg
tgtgctggaaatgatgatgttatcactttgaaaacaggagatgatgctgatacagtaaca
tttgtcttcgagtctccaaacaatgagaaagtatccgactatgaaattagactcttggac
attgatgcagagcatttaggaattcctgaaactgaatatagttgtgttgtgaaaatgccc
tctggagagtttgcaagaatatgcagagatttaagtcagattggagaatctgttgtcatt
tgttgtacaaaagaaggggtaaaattttctgcaagtggtgacttgggaacaggcaatatt
aagctcgcgcaaaactgcagctctgataaggaagaagaggcggtaattattgaaatgaca
caagcagtgaccttgacatttgctcttcgctacctcaactatttctccaaagcttctcca
ctctcgcagcaggtcactctctccatgtctgctgatgtacctttagttgttgaatacaaa
gttgctgatatgggatatctgcgctactatttggctccaaagatggaagatgctgatgat
tga

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