Ruditapes philippinarum (Manila clam): 132716138
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Entry
132716138 CDS
T09557
Name
(RefSeq) proteasome subunit alpha type-6-like
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
132716138
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132716138
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rphi03051
]
132716138
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
132716138
Peptidases and inhibitors [BR:
rphi01002
]
Threonine peptidases
Family T1: proteasome family
132716138
Proteasome [BR:
rphi03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
132716138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
132716138
NCBI-ProteinID:
XP_060555313
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDSAVVVTQKKVPDKL
LDASTVTHLFQLTEDIGCVMTGMIADSRNQVQRARYEAAKWKYNYGYEIPLDMLCKRIAD
VSQVYTQSAEMRPLGCSMILIGYDQENGPLVYKTDPAGYFCGFKATTAGVKQLEANSFLE
KKIKRKQDFTFNEAVEIAITCLSTVLSADFKASEIEVGAVTKANPHFKILTEEEIDVHLV
AIAEKD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaggaagtagcgctggattcgatagacatattactatcttttcaccagagggt
agactttatcaagtcgagtatgcattcaaagctataaatcaagggggattaacatctgtt
gctgtcagaggaaaagacagtgctgttgttgtgacacagaaaaaagttcctgacaagctg
ttagatgctagtacagttacccacttgttccaactgacagaagatataggatgtgtaatg
actggaatgatagctgatagcagaaatcaggtacagagagcaaggtatgaggcagccaag
tggaagtacaattatggttatgaaataccattagatatgctgtgtaaaaggatagcagat
gtgtcacaagtctacacacagagtgctgaaatgagacctcttggatgtagtatgattctc
ataggttatgatcaggaaaatggtcctctggtatataaaactgacccggcaggttatttc
tgtgggttcaaggcaacaacagctggagtgaaacagctagaagccaacagtttcctggag
aaaaaaatcaagagaaaacaggatttcacattcaatgaagctgttgagattgcgataaca
tgcctgtccacagtgttgtctgcagattttaaggcatcagaaatagaagttggtgcagtt
actaaggcaaacccacattttaagatcttgacggaagaagaaatagatgtacatctagtt
gctatagctgagaaagactga
DBGET
integrated database retrieval system
