Ruditapes philippinarum (Manila clam): 132716221
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Entry
132716221 CDS
T09557
Name
(RefSeq) TBC1 domain family member 15-like isoform X1
KO
K20168
TBC1 domain family member 15
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132716221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132716221
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132716221
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
132716221
NCBI-ProteinID:
XP_060555428
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MPETLKIHLKNRGSAVRKSVLNLRKRLNDHTNGSRVYRSSLSHSLDGVTLYEKDGVYIHI
NVNTTTSDKDAHLPGRIYLLQKEEGTFIEWKAEEVMSLDNHSEQDWAMISSVGYQPDRGS
DTVSDQKAERKRYNVSFDVLDLKSFKRSAPTHGWAYIIFILKDGTTYPAVHFHNGGSKAL
LKELEKFIHIRRSPTDNRLFIVQDHDPEALSMSFDELNLFQDSQGDLVTKFIKDPYTTTM
GGFSKVTNFLKDVLLQPEVENLRPSKVEEILSEDIPGMEINNQDEPGYELVSKTKLPQRP
DVNRGTPLTSQQWSKHMDKEGRIINVDEVKDQIFRGGVDPALRIDVWKFLLGVYEWDSTY
SSRTKTRKRKLDDYFRMKLQWTTIRSDQERRFSLFKERKCLIEKDVTRTDRTHKFFEGEG
NPNLQVLHDILMTYCMYNFDLGYVQGMSDLLSPILVVMENEVDAFWCFAGYMERVCDNFQ
MDQEGMKTQLSQIHKLMQYTDPELCNYLESHESGNFYFCFRWILIHFKREFSFADAQRLW
EVIWTDRPCKNFHLIICLAILDTEKTTLMENKFGLTEILKHINDMSMAIHLEESLKKAEG
IFLQLKNAKHLPDGVKEILGFPTASVSSSPAGSRGSSGTSTPVIPHTPANTPVNVAVNAP
VNATLTVGYSKENSARLHLPEFLRDNGQKSNSGNASPDDSSIEILSDNCNSGTSNYYN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaacacttaaaattcatctaaagaatagaggaagtgctgtccgaaaaagtgta
ttaaatttaaggaaaaggctaaatgatcatacaaatggttcaagggtctacaggtcaagc
ctttcacattcattggatggagtgacactgtatgagaaggatggtgtatacatacacatc
aatgtgaatacaaccacatcagacaaagatgcccatctacctggtagaatatatctacta
caaaaggaggaaggaacctttattgaatggaaggcagaagaggttatgtcccttgacaac
cactccgaacaagactgggcaatgataagttcagttggttaccaacctgataggggttct
gacacagtatctgaccagaaagcggagagaaagcgttacaatgtgagttttgatgtcctt
gatttgaagagtttcaaaagaagtgctccaactcatggctgggcatatatcatcttcata
ctgaaagatggaaccacgtaccctgctgtacactttcacaatggaggcagtaaagctttg
ttgaaggagttagagaaattcatccacataagaaggtcacctacagacaatcgattgttc
attgtacaagatcatgacccggaggccctgtctatgtcatttgatgaacttaatctcttc
caagattcacaaggagatcttgttactaaattcataaaggacccatacactacgaccatg
gggggtttctcaaaagtgaccaactttctgaaagatgttttgctacagcccgaagtagaa
aaccttcgtccgtcaaaagtggaagagatcttgagtgaagatataccaggcatggaaata
aacaatcaagatgaaccagggtatgagctagtatcaaagacaaagcttccacaaagacca
gatgtaaacaggggaactccgctcacttcccaacaatggtcaaaacatatggacaaggag
gggagaattattaatgtagacgaagttaaggaccaaatctttagagggggtgtggatcca
gcattgagaatagatgtatggaagtttttgctgggtgtgtatgagtgggactctacctac
tctagtagaacaaagactagaaaaagaaaattggatgactattttcgtatgaagttacag
tggacaacaatacgttcagaccaggagagaagattttcactgtttaaagaaagaaaatgt
ctgattgagaaagatgtaacgaggacagatcgtacacacaagttctttgaaggggaggga
aacccgaatctacaagtgttacatgatattctgatgacatattgtatgtacaactttgac
ttgggatatgtacaaggtatgagtgatctgttgtcaccaattctagtcgtcatggagaat
gaggtggacgccttctggtgctttgctggttatatggagagagtttgtgataactttcaa
atggaccaagaaggaatgaaaacacaactttctcaaatacacaaactgatgcaatatact
gaccctgaactgtgcaattatctagagagccatgagtctggaaacttctatttctgtttc
cgctggatattaattcactttaagagagaattttcatttgctgatgcacagagactttgg
gaggtaatatggacggaccgaccttgtaaaaacttccacctgataatctgcctggctata
ctagatacagagaagaccaccttgatggagaacaagtttggtctaacagagattctaaag
catattaatgatatgagtatggcgatccatttggaggagtcgttaaaaaaggcggagggc
atatttttacagctaaagaatgccaagcacttgcccgatggagtaaaagaaattctcggt
ttcccaacagcatcagtttcgtcttccccagctggttctcggggaagttccggaactagc
acaccggtcattccacatacaccggcaaatactccggtgaacgttgcggtcaatgcacca
gtaaatgcaacattaactgtcggttatagtaaagaaaatagtgctagacttcacttacca
gaatttttacgagacaatggacaaaaatcaaatagcggaaatgcgtcaccggatgatagc
agtatagaaattttgtcggacaattgtaattctggaacgtcaaattactacaactaa
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