Ruditapes philippinarum (Manila clam): 132716245
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Entry
132716245 CDS
T09557
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132716245
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132716245
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132716245
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132716245
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
132716245
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
132716245
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132716245
Prokaryotic type
Other AARSs
132716245
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132716245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
zf-His_Me_endon
Motif
Other DBs
NCBI-GeneID:
132716245
NCBI-ProteinID:
XP_060555463
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MRLTYRLLKNVSKRNLLKSIRAEGTSFGFGNESQKTINSSKTVIVEYSSPNIAKPFHVGH
LRSTILGNYIANLYERLGWNVVRLNYLGDWGTQFGLLAVGFQRYGNEEDLQANALHHLFE
IYVKINEDVAAEKKEGKSVTHQEGMEAFRKMEQGDTEMLNIWQRFKDISIQEYSKLYQRL
GVTFTEYHSESMYDKEAISLTERLKHTGILQTDSEGKGYIQIESDKGIPDKVNILKSDGT
TLYITRDIAAIMDRAEKYKFDKIHYVVENAQHMHFSHLCGAMNRFPEWNNRLNEDLHVKF
GRIEGISTRKGNVVFLKDVLDEAASRFKTSMMAKKNYKIDEKDIDAVTEELGKSSIIVQD
LGQRRIKNYKFNWERIMYSAKLQYCHARLWNQTQTETLMAHHVTEPVMFVRVKLIAFSSL
TKLVLTVTYFL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaacatatagactgctcaaaaatgtttcaaaaaggaatttattaaagtcaatt
cgagctgagggtacatcatttggatttggaaatgaaagtcagaagacaataaattcaagc
aaaactgttatagtagaatacagttcacccaatattgctaagccatttcatgttggacat
ttaaggtctacaatacttggcaattacatagctaatctgtatgagagactgggatggaac
gttgtaagactgaactacttgggagactgggggacacaatttggtttattagctgtagga
tttcaaagatacggaaatgaggaagatcttcaggcaaatgctttgcatcatctgtttgaa
atatatgtgaagataaatgaagatgtagctgcagaaaagaaagaaggtaaaagtgtgaca
caccaggagggcatggaagcattcagaaaaatggaacaaggtgatactgaaatgctcaac
atttggcaaagatttaaagacatcagtatacaggagtattctaaattgtatcagagatta
ggtgtgacattcacagagtaccattcagagtcaatgtacgataaagaagccatatcatta
acagaaaggttaaagcacacggggatactacagacggacagtgaaggtaaagggtatatt
caaatagaatcagataaaggtataccagataaagtgaatattctgaaaagtgatggtaca
acattgtatattacaagggatattgctgccattatggacagagcagagaagtacaagttt
gataagatacattatgttgtagaaaatgcccagcatatgcattttagtcatctgtgtggt
gccatgaatagatttcctgagtggaataatagattgaatgaagatctccatgtaaagttt
ggtagaattgaaggaataagcacaagaaagggcaatgtggtttttctgaaggatgtttta
gatgaagcagcgagtagatttaagacatcaatgatggcaaagaaaaattataaaattgat
gaaaaagacatagatgccgtaactgaagagttggggaaaagttcaataattgttcaggat
ctcggccaaagacgcataaagaattacaaattcaattgggaaagaattatgtacagcgca
aagctgcaatattgtcatgctagactttggaatcagactcagacagagacactgatggcg
catcatgtaacagagcctgtaatgtttgtacgtgtaaagttgattgccttctctagtttg
acaaagctagtgttgacagtcacatactttctatga
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