Ruditapes philippinarum (Manila clam): 132716299
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Entry
132716299 CDS
T09557
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K24214
otolin-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132716299
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
132716299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
132716299
NCBI-ProteinID:
XP_060555529
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
VGNKDKNIHAGDSYTGSYLLKAASIHDYCRSFYNLCDSRSARGPPGPPGVPVDRGPPGPP
GPQGPKGDQGQPGERGPPGRFGFDGIAGTPGDKGEPGEKGDRGLIGFDGQKGDIGYPGPK
GDKGNIGPIGARGSIGPQGHPGPEGVKGHVGDEGRRGKTGKEGPKGDKGNKGVDGIPGVP
GFKGETGVTGERGPPGYGINCICEKGDKGEKGQRGLVGFTGYKGDDGIPGQKGDRGFGLK
GEQGPIGPPGIPGLKGQKGDCDVWSKEKKEFRVVNIDPKDGSNNQLNDIPQQDYQAHEDG
IKQSTGHGSRGSRSSGTNSVNHASRTICSLIQYMIMFLLHLFSHQRNFSFHN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtaggaaacaaagacaaaaatattcatgcaggagattcctataccgggtcatatctttta
aaggcggcatctattcatgattattgtagaagtttttacaatctttgtgattcaagatct
gctcgtggtccaccaggacctccaggtgttcctgtcgatcgtggtcccccgggtccccct
ggaccacaaggaccaaaaggagaccaaggacaaccaggtgaaagaggacctcccggaaga
tttggttttgatggcatcgccggaaccccaggcgacaaaggtgagccaggcgaaaagggt
gacagaggcctgattggttttgatggtcaaaagggcgacattggttacccaggaccaaag
ggagacaaaggaaatatcggtcccattggtgcaagaggatcaatcggtccacaaggtcat
ccaggtcctgaaggtgtgaaaggacatgtgggagatgaaggaagacgtggtaagactggt
aaggaggggccaaaaggtgataaaggcaacaagggcgttgacggtattccaggtgtaccg
ggcttcaagggcgaaactggggttactggagagcgtggaccacccggatatggtattaac
tgtatctgcgaaaaaggagacaagggagagaaaggacaaaggggtttagttggttttact
ggttacaaaggagatgatggaattccaggccaaaaaggagatcgcggttttggtttgaag
ggagaacaaggaccgataggccctccaggcattccgggtcttaaaggtcagaagggagac
tgcgatgtgtggtcaaaagagaaaaaggaatttcgagttgttaacatcgacccaaaagat
ggtagcaacaatcagctaaatgacataccgcaacaagattatcaagctcacgaagatgga
attaaacaatcaaccggtcatggatcacgtggatcaagatcaagtggaactaactctgtc
aaccatgcttcgaggactatatgttcattgatacaatacatgatcatgtttcttctacac
ttgttctcacatcaaaggaacttcagttttcataactga
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integrated database retrieval system
