Ruditapes philippinarum (Manila clam): 132716326
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Entry
132716326 CDS
T09557
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132716326
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
132716326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
VWA
Ig_3
TSP1_spondin
Ig_2
CILP_5th
I-set
CarbopepD_reg_2
CILP
VWA_2
ig
CarboxypepD_reg
TSP1_CCN
V-set
Motif
Other DBs
NCBI-GeneID:
132716326
NCBI-ProteinID:
XP_060555559
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MILVSSILLCLVYSVVGETGQRCTNSPIDIAIALDTSDIVTNSHFEAEKTLTKEIASNIF
NQDNRLALVTFAEQATIQFNLDTYKSLNDLNLAIDFMWRATGQSRLEEAINYSLIHGFTG
RNATRQSAPKFLIVVSHSRTLNDTQFNRISDKLQENMVELLFLDNQSSSTVQKSNIKIQP
SPTTSTVANITKDVIDILCKGAGVLKPWTQWSACGRTCGTGIRRRFKECVKRRENDTCLG
KNLETEKCTMRQCTDSIDGGWTYWTEWSKCTKTCDSGKQTRQRYCSAPVPANGGSFCKGP
RSQQRNCSDWKCPDCSFVCGKDATLSSKCDVCLCINTTLLVKVKSNTNVPLETVEVHILS
ISRKRLGVTDSNGTFLVKNVCLRNASIILHKDGYVDETISVKQENNINLNITQKIYRMVS
PMILKHPENKVRVINQNATLCCIATGRPKPASVHWFKDGIELPNANKLLVLTNISLSDAG
VYSCTVETEAGIVKSEEASLKVVAIADKQCSNPLLYSRKLPTSCYAEQNGSNVTVVDIGK
CSREHCQSKVFTDEETCSDKESNYCCEENQTTEIEVFCPGFSYKLKRIKSCACKICMISS
TVEGSAYGKHENGSKIPFAYGFLYIDGKKAAVTNERGYFHFELLRSKTRAIVYFVDETFY
MFVPTTKIMVAQRDSTSFVTVVLPLKPNPIKFDSHLGISISLGGSNNLPPVGGITIPEHA
LITSDGMNYTGKAKATVHFMDPRKLSDLEASNGNFVYNTPDGSTGPLETFGMFRTTVEDD
KGFPLKVKKKLQFNLDASIFNVSFKDDGSPDLALWNYDINNGIWVETAKMMLSDSNFATG
RRKLLANVLVGEYEVQEIDHIDLTEDTPVMERVIIGYTNCDHSVPIYGDRIVKHDSKTKR
NACYLSVSVYSDLTFRERSAGGTNIVAITQEMYGQKFQGMDSKTTDTNGHACLSVFCDSK
VYVYAENKIDGSRLYASQSHDLPVWYENFNNTKNNTEVEIFSYDIDDITENGKTRYSPFV
SFEDFSKCNEEFEKSYKFQFAYNSIPHALTTTISKDTFDNALSWYPVSPEKPYGKSCFIK
VAIKTDDNDARFIAQSYQNKIENSKQYGTYEVSPTFDVSSPDKTQKAACIEYRCAGQFAE
NGTIKYNAKTIVDINLISTRSCTIRILTKASNMSVKKNNKGFTFVADPSRNYGPDFGIYV
GNGNADKISSFCASGIDSGAVEKIMKPYKNTAVEFSCT
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtttcaagcattctcttgtgtcttgtgtacagtgttgttggggaaacagga
caaagatgcacgaattctccgatagatattgccattgcactagatacatctgatatcgtg
accaatagccattttgaggcggagaaaactctgacgaaagaaatagcttccaacattttt
aatcaagacaacagattggcactggtaacatttgcagaacaagcaaccatccagtttaac
ttggatacatataaatctttaaatgatttaaatctagcaatcgattttatgtggcgggca
actggacaaagtcgtttggaagaagcaataaactattcgttgatacatggttttaccgga
cgcaatgctacaagacaaagtgctccgaaatttcttatcgttgtttcacactcacgaaca
ttgaatgatacacagtttaacaggataagtgataaactacaggagaacatggttgaactt
ctttttctagataaccaaagtagctcaactgtacagaaatcaaatataaagatacaacca
tccccaactaccagtactgtagcaaatatcacaaaagatgttatagatatattatgcaaa
ggagctggcgttttaaaaccttggacacaatggagtgcatgtggcagaacatgtggaaca
ggcatcagacgaaggttcaaagagtgtgtaaagagacgtgaaaatgatacctgtcttggg
aagaacttagaaaccgaaaaatgcacgatgcggcagtgcacagatagtatcgacggagga
tggacgtattggacagagtggtcgaaatgtaccaaaacatgcgattccggaaaacagact
agacaacggtattgcagtgcaccagtaccagcaaatggtgggagcttttgcaaaggacca
agatcacaacagagaaattgctccgattggaaatgtccagactgctcatttgtatgtggt
aaagacgctacattatcttccaaatgtgatgtatgtttatgcatcaatacaactctctta
gtgaaagtgaaaagcaacacaaacgttccgttggaaactgtagaagtacatattttatcc
atatcacgtaaacggcttggcgtcacagacagcaatggaacatttctggtgaaaaatgta
tgtttgagaaatgcgtcaataatactgcacaaggatgggtatgtcgatgagaccatcagc
gtgaaacaagaaaataacataaatttgaacataacacagaagatttacaggatggtttct
ccaatgatattgaagcatccggaaaacaaagtcagagtgattaatcaaaacgcaacatta
tgttgtatagcgactgggagaccgaaaccggcatcagttcattggtttaaggacggtatt
gaattgccaaatgccaacaagttactagttctcacaaatataagtctatctgatgctggt
gtttacagctgtactgtagaaacagaagccggaattgtgaaatcagaagaagcatcatta
aaagtggtcgcaatcgcagacaaacaatgttccaatccccttttgtattcacgcaaactg
ccaaccagttgctatgctgaacaaaatgggtcaaacgtgacagtagtagatatcgggaaa
tgtagtagggagcactgtcagtcaaaagtatttacagatgaagagacatgctcggataaa
gaaagtaattactgctgcgaagaaaaccaaactacagagatcgaagtattttgtccagga
ttctcttataaacttaaacgtataaaatcatgtgcatgtaaaatatgcatgatttcttcg
actgttgaaggttcagcatacggaaagcatgaaaatggatctaaaattccgttcgcatat
gggttcctgtacattgacgggaaaaaagcggcggtcacgaatgaaagagggtatttccac
tttgaattgctacgtagtaaaacaagagcgatagtgtattttgttgacgaaacattttac
atgtttgtaccgacaacaaaaataatggtcgcacaacgtgatagcacttcgtttgtgact
gttgttttaccgcttaaaccgaatccaatcaaatttgacagccatcttggaataagtata
agtttaggaggttctaacaatcttccaccagtcggtggaataactatcccagaacatgct
ctgataacttcagatggaatgaattacaccggtaaagcaaaggcaactgttcatttcatg
gatccaagaaagctgtccgatcttgaagcctcaaacggtaattttgtctataatactcca
gatgggtcgacaggacctcttgaaacatttggaatgtttcgtacaactgttgaggacgac
aagggatttccgcttaaagttaaaaagaaattgcaatttaatctcgatgcttcaatattc
aatgtgtcgtttaaagacgatggctctccagatttggcgttatggaattacgatattaac
aatggcatttgggttgaaacagcaaaaatgatgctttccgattcaaattttgcaactggt
aggagaaagcttttagcgaatgttttggttggtgaatatgaggttcaagaaatagaccac
attgatttaacagaagacacacctgttatggaaagggttatcataggatatacaaactgt
gatcatagtgtaccaatttatggcgataggattgtgaaacatgatagtaagactaaacga
aatgcttgttacctaagcgtttctgtgtactccgaccttacatttagagaaagatccgct
ggtggaacaaatatagtagcaattactcaagaaatgtacggccaaaaattccaaggcatg
gacagtaaaacgacggacacaaatgggcatgcatgtttgagtgttttctgcgattctaaa
gtgtatgtttatgcagagaataaaattgatggtagtagactttatgcaagtcaatcgcat
gacctcccagtgtggtacgaaaactttaataacacgaaaaacaacacagaagtagagatt
ttctcgtatgatatcgacgatattaccgagaatggaaaaacacgttacagtccctttgta
tcattcgaagatttttccaaatgtaatgaagaattcgagaagagttataaatttcagttt
gcatacaattctataccacatgcactgacgacaacaataagtaaagatactttcgacaat
gcattatcatggtaccccgtatctcccgagaaaccatacggaaaatcatgttttatcaag
gttgcaatcaaaactgatgataacgacgcaaggtttatagcgcaaagctaccagaacaaa
attgaaaatagcaagcaatatgggacatatgaagttagcccgacgtttgatgttagttcc
cctgataaaactcagaaagctgcttgcatagaatatcgatgtgctggacagtttgctgaa
aacgggacgatcaagtataatgcaaaaactatcgtagacattaatttgatttccactaga
agctgtacgataagaattttgacaaaagcttccaacatgtcagtcaaaaagaataacaag
gggtttacgtttgttgctgatccttcaaggaattatggccctgactttggtatatatgtt
ggcaatggaaatgcggacaaaataagtagtttttgtgcaagtggcattgattcaggagca
gttgaaaaaataatgaaaccgtataaaaacacggctgtcgagttttcatgtacataa
DBGET
integrated database retrieval system
