Ruditapes philippinarum (Manila clam): 132716374
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Entry
132716374 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
KO
K10895
fanconi anemia group I protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132716374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132716374
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
132716374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S1
FANCI_S2
FANCI_S4
FANCI_S3
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
132716374
NCBI-ProteinID:
XP_060555622
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MDKKIITFAEDNKIEELGECLKTVSNDELCKMIERKVLKGRNDTFTLVRAILLGSPPDCT
TSVERRSCVYKQCIEALQKNDMNNKMASELVGLLMLEADTLPGPTLAELASIYVDGIKSD
SSQSGKALELLPKILSAIASKENIVYAGNHMKGSEYKSHVLNTLCSCRWDPGSVVNLASM
FRDVPLTNEELKFVIEKVLRMFRELDMGDIPALVYQLLLLATKGHKKLVLEGLXLFQEDR
HRETRGQHSSEDLLDDGINNTESLRQTEGTVILHISFAVKQHQDLGREFIKCLKGYQNCS
ATKTLSPFSLAMALSLARINRFEDQIFDFLKATFLKSYKDFDKQSQSCWIQEIVSDMVSV
EDYVLQTVNNSSYGWDHVVQGLVQLGFILMDSFGPKAAFGRMDLLPSIQSGPTHQTCQLG
AKILLKTFKAHEMVRSEILEQIFNRVITKATSPVSHFLELLGDIVFASPQLLLDSTTKVR
EMFDYLSFLCPTSAEGLLRAIQPLLKLSMNLKDSLILVLRKAMFSRQLDARKIGASGFMM
ILKHFRVLGGIRSSQCSQPSFSCSQVEVDIHVRHNASSNEALCLEILGNLRRCLSQQADV
RLLLYQGLVDVLDRNSQLCDPILSMLMSQLKGYYEKNEEMNPPLKLEPCILAQGDQVFLA
EPLAHLLCCIQLCLIKSDEFRKKQQASNDDDDDDSVVQSELEEIMKSLTDRMITSEMEDF
ELDKSADYSLANSVGVRNNIFAILVLGTHEALIEYTFMKDTISESKVRQMTQLFENHKKL
SDVIREKAGAAAGKKGKTQAKPPISLFSIKFVTRVMDFMISGDDQFDSDLVDALVQNTDF
FKYILTVTQQKLLQIQDKGQCDGSEGKQKSKIFDYCCELAGLLLKYYKEHQKGEGTQRVT
EKHILTLTLECLCCIVTIVTQQFSSELDKFLSSIGEREENGNTDEHVYHYIKKLQRLVMN
IFSAEEDHQNMKDVGLLLNIIYHLSQSLSSRFSSCEHIMSWLEKLCREQNIDDLSLCKSM
LTYLLNMGHKWKTSPILLRDLAQDIHAQIGDIDQEIELDDRTNFAIVTLRAAAPTVLQLV
LNHCERELDNTDWVVTRVRADATADISTCTGGESPQLTQREGHEKSICXRLGVIVTTFHE
LVNGISHRFLALYASRSGHLSARFEKLVKLSGTHLTHYCYGLITYIQVNRLLLFTQ
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagattatcacctttgcagaagataataagatagaagagctgggggaatgt
ctaaaaacagtcagtaatgatgagttgtgtaaaatgatagagaggaaggtgttgaagggg
agaaatgacacattcactcttgtccgagcaatattgctaggttcaccaccagactgtaca
acttctgtagaaagaaggtcttgtgtgtacaaacaatgcatagaagctcttcagaaaaac
gatatgaacaataaaatggcgtcggagctcgtcggtcttctgatgttagaggctgataca
ttaccaggaccaactctagcagaacttgccagtatatatgttgatggtatcaagtcagat
tcctcacagtcaggaaaagccttagaattgctgccaaagatattgtctgcaatagcttca
aaggagaatatagtgtatgcagggaaccatatgaaaggctcagaatacaaaagtcatgtt
cttaacaccctatgttcatgcaggtgggacccaggtagtgttgttaacctagcatctatg
tttagagatgtcccactcaccaatgaagagctgaagtttgttatagagaaagtgttgaga
atgtttcgagagctagacatgggtgatatcccagcacttgtttaccaactactcctgtta
gctactaaggggcataaaaagcttgttctggagggtttataactttttcaagaggatagg
cacagggaaacccgagggcaacattccagtgaggacctactagatgatggtatcaacaac
acagaaagtttgagacaaaccgagggtactgtcattctacacatcagctttgctgtcaaa
caacatcaagatctcggtagagaatttatcaaatgtctgaagggttatcagaattgcagt
gctacaaaaacactttcaccattctcattggccatggcactatcactggctagaataaat
agatttgaggaccagatttttgatttcctgaaagcaacatttttgaaaagttacaaggac
tttgacaaacagtctcagtcatgttggatacaggagattgtctcagatatggtctctgta
gaagattatgtattacaaactgtcaataacagttcatatggctgggatcatgttgtccaa
ggtcttgtccagctaggatttatactgatggattcatttggacctaaagcagcatttgga
cgtatggacctactgcccagtatacagtcaggacctacacatcagacatgccagcttgga
gcaaagatattgttgaaaacattcaaggcccatgagatggtgagaagtgaaatattagaa
caaatcttcaatagagtaataactaaagctacatctcccgtctctcatttcctagaatta
ctaggagatattgtgtttgcctcgccacaactgttgttggactctacaaccaaagttcgg
gaaatgttcgactacctctcctttctgtgtcccacctcagccgagggtttactgagagcc
atacagccacttcttaaactgagtatgaatctcaaagattctctcatcttggttcttaga
aaagccatgttctcaagacagcttgatgcgagaaagattggagctagtggatttatgatg
atactgaaacattttagagttctaggaggtataagatctagtcagtgtagtcaaccttca
ttctcatgtagtcaggtagaggtagatatacatgtacgtcacaatgcctccagtaatgaa
gctctatgtctagagatactaggtaacttgaggagatgtttatctcaacaagctgatgtt
agactactgctttatcagggacttgttgatgtattggacaggaacagtcagttatgtgac
ccaattttatcaatgttgatgtcacagttaaaaggttattatgagaagaatgaggaaatg
aatccacctctgaagttagagccatgtatacttgctcagggagaccaagtatttcttgct
gaacctcttgcccatcttctatgctgtatacagctatgtttgattaaaagtgatgagttt
aggaagaaacagcaggcaagcaatgatgatgacgatgatgattcagtcgttcaatcagag
ttagaagagatcatgaaatctctcaccgataggatgattacatcagaaatggaggacttt
gaactggacaaatcggcagattactcgctcgcaaacagtgttggagttaggaacaacatt
tttgctatattagtgctaggaactcatgaggctctcatagagtatacatttatgaaagac
actattagtgaatctaaagtgcgtcagatgacacagctgtttgagaatcacaagaaatta
agtgatgtcatacgagagaaggctggggcagctgccggtaaaaagggtaaaactcaggcc
aagcctcctatcagcctattttccattaagtttgttacgagagtgatggactttatgatc
agtggagatgaccaatttgacagtgatctagttgatgctctggttcaaaataccgacttc
ttcaagtacatcctgacagtgacccagcagaaactgctccaaatacaggacaaaggtcaa
tgtgacgggtcagaaggcaaacagaaatctaagatatttgattactgttgtgaattagca
ggactgttgttaaagtattataaggaacatcagaaaggagaaggcactcagagggtgaca
gagaaacatatactgaccttgacattagaatgtttgtgctgcatagttaccattgtaacc
cagcagttctccagtgaacttgacaagtttctgtccagtataggtgaaagggaagagaat
gggaacacagatgaacatgtttatcattatataaagaaacttcagaggctagtaatgaat
atattcagtgctgaagaggaccatcagaatatgaaagatgttggtttattattgaatatc
atctaccatctgagtcaatctctgtcttctagattctcaagttgtgaacatataatgtca
tggcttgaaaaactttgccgggaacaaaacattgatgacctgtcattatgtaagtccatg
ttaacgtatcttctcaacatgggacacaagtggaagacatcccctatacttctgcgagat
ctcgcccaggacatacatgcacaaataggagatattgatcaggagattgagcttgacgat
cgtacaaactttgccattgtgacactgcgagcagcagcccctactgtactacagttagtg
cttaaccattgtgaaagggaactagacaacactgactgggtggtgaccagagttcgtgct
gatgctactgcagatatttctacctgcacaggtggggaatcccctcagttaacacagcgt
gaagggcatgagaaatctatctgcnaaaggcttggtgtcatagtaacaaccttccatgaa
ctcgtcaacggcatttcccataggtttttggcattgtatgcaagccggtcaggacatctt
agtgctagatttgagaagcttgtaaaactgtccgggactcatctgacacactattgttat
ggtctgataacttatatacaggtaaatagactgcttttatttactcagtaa
DBGET
integrated database retrieval system
