Ruditapes philippinarum (Manila clam): 132716417
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Entry
132716417 CDS
T09557
Name
(RefSeq) iroquois-class homeodomain protein irx-4-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132716417
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
132716417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
132716417
NCBI-ProteinID:
XP_060555672
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MSFKGSPVSMHRPVTTQTTSALNIRTSTPKVVYPSVGRQMTSPRCCETGRPVMMDPVTGA
AICSCQLKSGIPSYLSRVPSLPETVYGAAAGQQYPPNVVMGNEATSAFYQMAHSLKAERA
TDGLKAAPPGVNSPYYLEHLMAAHPYNAFYSGFDINSARRKNATRETTSALKAWLYEHRK
NPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKESKMDDKDIDLSDLDVDDQSESNR
DVTHLSVSEDDDSHNLTTDLSDISDAEESSTNNIAPKNYIQRMLPADQRVGSDFEKYSNE
ITNGNVDTKDTSNEPSVKALKNSTTTSGLDVDQLRNQSRERNTSGQHIPQARPKIWSISE
IISPKSEKEKTSV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaaaggatcgcctgtatccatgcatcgaccagtgaccacacagacgacatca
gctttgaatatcagaacatcgaccccaaaagtcgtgtatccatctgtcgggcgtcaaatg
acgtcaccacgatgctgtgaaaccggacgtccggtgatgatggacccagtgactggtgcc
gcaatatgttcctgtcagttaaaatctggaataccaagttacctgtcaagggtaccaagt
ttaccggaaacagtttacggagctgcagccgggcaacagtatcctccaaatgtcgtcatg
ggaaacgaagcaacgtcagccttttatcaaatggcgcatagtttgaaggcagagagagca
acagacggtctgaaagcagcgcctcctggcgtcaattcaccgtactacttagagcacctg
atggcagcacacccttacaatgcattttactcagggtttgacataaacagtgctcgaaga
aagaacgccaccagagagacaacaagtgccctgaaggcatggctgtacgaacatcgtaaa
aacccgtatcctaccaaaggcgagaaaataatgctcgccattattacaagaatgaccttg
acacaagtatccacgtggtttgccaatgccagaaggaggctgaagaaagaatcaaagatg
gacgacaaagatattgacctaagtgacctcgatgttgacgaccaatcagagagtaaccgg
gatgtgacccacctttctgttagtgaagatgatgacagccacaacctaacaaccgatctg
tccgatatttcagacgcggaggaatcttcaacgaataacatagcgccaaagaactatatt
cagagaatgttacctgcagatcaaagagttggttcagactttgaaaaatattcaaatgaa
ataactaatggaaatgtagatacaaaagatacctcaaatgaaccaagtgtcaaagcactg
aaaaacagtaccactacttccggtttagatgtagaccaattacgtaatcagtcacgcgag
cgaaacacttccgggcagcatataccacaagccagaccaaaaatctggtctatttcagaa
ataatcagtccaaaaagtgagaaggaaaaaacatctgtttga
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