Ruditapes philippinarum (Manila clam): 132716419
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Entry
132716419 CDS
T09557
Name
(RefSeq) chorion transcription factor Cf2-like
KO
K05707
snail 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132716419
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
132716419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2HE
zf-BED
zf-C2H2_15
zf-C2H2_11
EndoS_helical
Motif
Other DBs
NCBI-GeneID:
132716419
NCBI-ProteinID:
XP_060555675
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MKPQKFSINDILTRDPPPKKTVVLKEDKNTAVFDVKDGNQGVPDLPTPPISPEPILESKR
KSQINDTPKRTNVGMTSAKRKRDPIGQILDSLCDNSDKKDQQTSSAFSPIVSSSCSSQLS
PLGMLAHCDRRCYQTSPSGTTCSPPQGMPSIPGGVMSQVQVSVEQLQYLHAQRLAHQQHL
QQQQRLAAMQATTAPFLAQQQNQYHLQMLREHQAKLMSYELNASMNAPHNPLAQNPAAWM
AWLKSSANPMTSLPLKESRIPPPPRYQCDACKKSYSTFGGLSKHKQFHCVSHVKKEFNCK
YCEKSYGSLGALKMHIRTHTLPCKCKLCGKAFSRPWLLQGHVRTHTGEKPFKCIHCGRAF
ADRSNLRAHLQTHSDIKKYGCKNCTKTFSRMSLLLKHEEGSCLGLRR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaaagttttcaataaatgacattttgacgcgtgacccgccaccaaaaaag
acagtggttttaaaagaggataagaacaccgcagtatttgatgtaaaagatggtaatcaa
ggtgtaccggatttaccaactccgccaatatctccagaaccgatcttggagtcgaaacga
aaatctcagattaacgacacaccgaaaaggaccaatgtgggtatgacatctgcgaaacgg
aaacgggacccaatcggacagattttagacagtctgtgcgacaactctgacaaaaaggac
caacaaacatcaagcgctttctctccaatcgtttcaagttcatgttcttcccagttgtct
ccccttggaatgttggcgcactgcgacagacggtgttatcagacgtcacctagtgggaca
acatgctcaccaccacaaggtatgccgtctataccaggcggtgtcatgtcacaggtccaa
gtttctgttgaacagcttcaataccttcatgcacagagattagctcatcagcaacatttg
caacaacagcagcgtttagcagcaatgcaagcaacaactgcaccatttttggcccaacag
caaaaccagtatcacttacaaatgctcagggaacaccaggcaaaattaatgtcatatgaa
ttaaatgcgagtatgaatgcaccacataatcctcttgctcagaatcccgccgcgtggatg
gcctggttgaagtcgtctgctaatccaatgacgtcacttcctctgaaagaatcgcgaatt
cctccgccgccacgttatcaatgtgatgcctgtaagaaaagttattcaacttttggaggc
ctttcaaaacacaaacaatttcactgtgtaagtcacgtgaaaaaagaattcaactgcaaa
tactgcgaaaaatcgtacggttctctcggcgctctgaaaatgcatattcgaacccacacg
cttccctgtaaatgcaaattgtgtgggaaggctttttcacgaccatggttactacaagga
cacgtaaggacgcatactggtgaaaaaccgttcaaatgtatacattgtggacgagctttt
gctgatagatcaaacctgcgcgcgcatctgcagacgcattcagatattaaaaagtacggc
tgcaaaaactgcacaaagaccttctcgaggatgtcgttattactcaaacacgaagaaggg
agttgtctaggtttaagacgatga
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