Ruditapes philippinarum (Manila clam): 132716427
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Entry
132716427 CDS
T09557
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132716427
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132716427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
132716427
NCBI-ProteinID:
XP_060555682
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MEEVAVEEADKPVENLKQTNGKATDNDESGFGEDISACSIEDKTFNDKMDTYEETGNHTD
LEQCSAYNKMLEGVEISQGDNHFMMSGLKKDDSGIYSEKSPSTTQTKEISDGEWSESVSE
SFEDTNVEIKGEGSMHIDIDKPNKISEKTGNKNMKNNDDVMCVEGINSKTEDIEIEDMED
EMLENMKCLENGKDNVNAINNKERQDIKVNCDKLDTLKVSNETDESESKSSGQQIDTDKC
DNNGMSNDDEDFADFVKKTVKSRSHVRKLVDYDTDDSDKESGSDSHVVIKGNRRYRKRKP
ETDSEDDNDIANTNDSKSKGNTSSEPNDGTPVLLRHSVLNDESEQNNAEISDSITDSSDD
SLHSPRARQESSSENEADDTPPLSEFGPPKQKWKALYDLRNREFGNSNLKDPGHFRKQVQ
GSLQMVKRFELQFKMEEHEGCVNALHFNSSGTLLASGSDDLNIVIWNWIRNRHDLVYDSG
HRSNVFQAKFMPFSGDCHVVSCARDGQVRLADLSSTGVCKGTKKVAQHKGAAHKLALEMD
SPHVVLSAGEDAVTYEIDLRVDKPNKLVTTKENDKKVSIYSIHSNPINSNEFCLGGRDHF
VRVYDKRKINEDVNSGLLKKFAPHHILGAGNDNIKANVTCACYNYNGSEILGTYNDEDIY
LFNNQEGDTAKYLHRYRGHRNNQTVKGVNFYGPESEFIVSGSDCGHIFLWDKATENIVQF
MEGDEGGVINVLEPHPYAPILATSGLDHDVKIWAPTAENPTNLKGLKKLIKRNSREREEE
RTNDGGMIDGSMLWFIMHHLRRGRRQRAREARAARGEPSPDVETSDTLSDEDLSTDDESE
SEGEGEPRDAISCNPS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttgctgtcgaagaagctgataagccagttgaaaacttaaaacaaacaaat
ggaaaagcaactgataatgacgaatctggttttggtgaggatatatcagcatgtagcatt
gaggacaaaacatttaatgataagatggacacatatgaagagactggaaaccatactgat
ttggaacagtgtagtgcctataataagatgctagagggagtagaaatatctcagggagat
aatcatttcatgatgagtggtttgaaaaaagatgacagtggtatatattctgagaaatcg
ccaagcactacacaaaccaaagaaatcagtgatggggaatggagtgaaagtgtaagtgaa
agctttgaggacacaaatgttgaaataaaaggagaggggagtatgcacattgatattgac
aagccaaataaaatctctgaaaagactggtaataaaaacatgaagaataatgatgatgtc
atgtgtgttgaaggtattaatagtaaaactgaagatatcgaaatagaagacatggaagat
gaaatgctagaaaacatgaaatgtttagagaatggaaaagacaatgttaatgccattaat
aacaaagaaaggcaagacatcaaagtaaattgtgataaattagatacattaaaggtttca
aatgagacagacgagtcagaatcaaaatcaagtgggcagcaaattgatacagataaatgt
gataataatggaatgtcaaatgatgatgaagattttgctgattttgtaaagaaaactgtc
aagtcacgttctcatgttaggaaactggttgattatgacactgatgattctgataaagaa
agtggaagtgattctcatgtggtcatcaaaggcaatagacgttaccggaaacgaaaacct
gaaacagatagtgaagatgacaatgatattgcaaatacaaatgacagtaaaagcaaaggt
aacacctcaagtgagcctaatgatggtacaccagtattattaagacattcagtgttaaat
gatgaaagcgaacaaaataatgcggaaatttcagactcaattactgattctagtgatgac
agtcttcattctccaagagcaagacaagaatcgtcatctgaaaatgaggcagatgacaca
ccaccattaagtgagtttggtcctcctaaacaaaaatggaaagccctatatgatctgaga
aatcgtgagtttggaaactccaatcttaaggatcctggtcattttcggaaacaggttcaa
ggcagtttgcaaatggtgaaaaggtttgaacttcaattcaaaatggaagagcatgaaggc
tgtgtgaacgctttacactttaacagcagtggcaccttactagctagtggctctgatgat
ttaaacattgtgatatggaactggattcgcaatcgtcatgatcttgtatatgatagtggt
catcgcagtaatgtatttcaggcaaagtttatgccattcagtggggattgtcatgtggtc
agctgtgctagagatggtcaagtacggctggctgatctgtcatccacaggggtctgtaaa
ggaacaaagaaagttgctcagcacaagggtgctgctcacaagcttgccttggaaatggat
tctccccatgtagttctcagtgctggagaagatgcagttacctatgagattgacctgagg
gtagataaaccaaacaagttggttacaacaaaagagaatgacaagaaagtgtccatctat
tcaattcattccaatcctatcaattccaacgagttctgtttgggtggtagagatcacttt
gtacgagtgtatgataaaagaaaaatcaatgaggatgtaaacagcggcctgttgaagaag
tttgcaccacaccatattttgggtgcaggaaatgataatattaaggcaaacgtcacatgt
gcatgctacaattataatggttcagagatactgggtacctacaatgatgaagatatttac
ctgtttaataaccaagaaggggacacggctaaatatttacacagataccgaggtcacaga
aataaccagaccgtgaaaggcgtcaacttctacggcccggagagcgagtttatagtcagt
gggagcgactgcggacatattttcctgtgggataaggccacagagaatattgtacagttt
atggaaggagatgagggcggagttataaatgttttggaaccacacccgtatgctccgatt
ttagcaacaagtggactggatcatgatgtgaaaatctgggcacctacggcagaaaatcca
accaatctgaaaggcctcaaaaagttaataaaacgtaactccagagaacgtgaagaagag
cgtacaaatgatggaggaatgattgatggttctatgctgtggtttattatgcatcactta
agacgggggcgaaggcagagagctcgcgaagctcgtgccgctagaggagaaccatctccc
gacgttgagacgtcggacacactcagcgacgaagatctatcgactgatgacgagtctgaa
agtgaaggggaaggcgaaccacgtgatgcaatctcatgtaacccatcgtaa
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integrated database retrieval system
