Ruditapes philippinarum (Manila clam): 132716445
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Entry
132716445 CDS
T09557
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132716445
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
132716445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
132716445
NCBI-ProteinID:
XP_060555705
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MTDIDDKISAQVANTVAEILRGEAIEEGFAGYIKHTPQSLQKKYEYNTELLSKLWTNIPQ
ESHSVGLKTYINSYFDVKNVNRVDLLASLLQTLAEKNVLQSKLICETLLDHEKMVYMNVK
PFIRAFQLIRKLVGGVDYKGCRDLLRMILHNHNIETQNANILPQVEAMIAVVAYILDRKV
CLLPSYLAVNEITKMSPEIKNWPHWKMGRLLSEFVYSFRPVAQMVTISGRSYLLPVVGHS
VATNNVWRLNSKDLKFSLSGPLPYSREVQEPQSGLLRYVLEQPYSRDMVGSMLGLNKQVK
QRCEVLEEQLVNLVVSAMEHSENLDSSADPGLSHLLWQHLSSQLIYFVLFQFASFPHMVI
SLYDKLKDRKLNKGRDHLMWVLLQFISGSIQKNPLSDFLPVLKLYDLLYPDNTTIAVPDV
SKASSTHTVAATCIWIHLNMKANTDNVQLQRPIPHALREHQEALGQHLESLKQNLGNRSL
PGNDYRIPLLCNAYSTNPQLFNLPMSILVESICGNNSKNTCFLPGNLVAAHPTQPLSMNL
LDSLTVHAKMSLIHSIVSKVIRQAKSKSTAALAPALVETYSRLLVYMEIESLGIKGFISQ
LLPTVFASHAWGILHTLLEMFSYRLHHIQPHYRVQLLGHLHTLSTIPLTNQNQLHLCVES
TALRLITGLGSAEVQPQLSRIFNEPKTAGFLSQDSEELNRVLVLTLARAMHVTGSESFST
NWCKDILATIIQSTPHSWPSHTSTCFPTCLNEFFHQNPIPREDKVNLKRNVETEYKKWRS
MANEADIIAHFSMQGTPPLFLCIIWKNLIDDSRIAPIAYRVLERIGPRALSAHLRMFCDF
IVYEFCLAGNQSYFTRYIEAINDMVWKCNILTIDRLVLCLALRNLENNEAQIAFYIIYQI
LVRSSDFKNRVADFLRENTPDHWLQSNWHDKHMTFHKNYPEKFFYEGIQDLNSPIQHQYL
PVYFGNICLRFIPVLDILIHRLIEMSSVQKFLESILDNLGGLYKFHDRPITYLYNTLHYY
DNKLANRSGLKRKLVGAIIRAHQEIHPNNWCLTEDYQRYLQMSADTTNWIPEQDYYIRLI
GRLVETIDGQSPFPSCDWRFNEFPNPAAHALHATCVELMALPVASQNVGVAILDVVLKSA
SQLPREKLMGWMNAVGLVLTALPETYWNVLNERIIETMQSSLLTNLGRTFFEMFDFLTCQ
SMYVESTCTYVVALAHAVWHHAGIGQLSVLPQFVKEKIKCCIKTEEQFLFLLYLIGPFLS
RFHIERTRCLLDLTVELYEILANIDKSCDHLHHMDIITDFLYHIKYMFVGDGVKNEVDKV
IRNLRPALQLRLKFISHTNVDETPVATPRESISSAGLESKGKYFGE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgacagatatcgatgacaaaatttctgctcaagtagcaaacactgtcgctgaaatactg
agaggtgaagctatagaagaaggttttgctggttatatcaagcatacccctcaatcatta
cagaaaaaatatgaatataacacagaactgctttcaaaattatggacaaatattccacag
gaaagccatagtgtgggacttaaaacttatattaatagttactttgatgtgaagaatgtc
aacagggttgatctattggccagtttgttacaaacattggcggagaaaaatgttttacaa
tcaaagttgatctgtgagacattgctggaccatgagaagatggtgtatatgaatgttaaa
cctttcatcagagccttccagctaatcagaaagcttgtgggaggagttgactacaagggt
tgtcgtgacttgttgaggatgatattacataatcataacattgagacacaaaatgctaat
attctaccccaagtcgaggccatgatagcagtggtagcatatattcttgaccgcaaggta
tgtctattaccaagctacctagcggtcaatgagattaccaagatgagccctgaaataaag
aactggcctcattggaagatgggcaggttgctgtcagaatttgtctacagtttcagacca
gtagctcagatggtcacaatatcggggagatcctatctgttgccggtagttggacattct
gttgccacaaataatgtgtggagattgaactcgaaagatctgaaattctcactcagtgga
cctctgccttacagtagggaggtacaggaaccccagtctgggttgctacgttatgtttta
gaacaaccttactcacgagatatggtgggcagtatgcttggactgaacaaacaggtgaaa
caaaggtgtgaagttctagaggaacaactggtgaacttggtagtctccgccatggaacat
tcagagaatctagattcctcggcagacccaggtttgagccacctcctctggcaacaccta
tcaagtcagcttatatactttgtgttgttccagtttgcatcattcccacatatggttatt
tcattatatgataaattaaaagatagaaagttgaacaaagggagggaccatttaatgtgg
gttttgctacagtttatctctggaagcatacagaaaaaccctttgagtgattttctgcca
gtattgaagctgtatgatttactgtaccctgacaatacaactatagccgtaccagatgtc
tcgaaagctagctccacccacactgtggcagctacgtgtatctggatacatctgaacatg
aaggccaatacggacaatgtacagttacagagaccaataccacatgctctaagagaacac
caggaggcactcggacaacatctagagagtttaaaacagaatttaggaaacagaagttta
ccagggaatgactacagaatcccattactctgtaatgcttacagcactaacccccagttg
ttcaacttacccatgagtatattagttgagagtatctgtggtaacaacagtaaaaacact
tgtttcctacctggtaacttagtggcagcccacccgacacaaccactatccatgaacctt
ctggactcgcttacagtccatgccaaaatgagtctgatccacagcatagtctcaaaggtg
attcgccaggctaaaagtaagagcacagcagctcttgcaccggctttagtcgagacctac
agtcgtttgttagtctacatggaaatagaatctcttggaataaaagggttcataagtcag
ttacttcctactgtatttgcgagtcatgcctggggtattcttcacactcttctggagatg
tttagttatcgtctgcatcacatacagcctcattatcgagttcagcttctaggtcatctg
catacgttatctacaatcccattgaccaatcagaatcaacttcacctttgtgttgaaagc
actgcccttagattgatcacagggctaggcagtgcagaagtgcaaccccagttgtctcga
atcttcaatgaaccgaagacagccggtttcctgtcgcaggattctgaggaattgaatcga
gttctggttcttacccttgctcgagcaatgcatgtaacgggatccgagtcattctcaaca
aactggtgcaaggacatcctggcaacaattatccagagtacaccacactcctggccatca
catacttccacctgcttcccaacatgcctgaatgaattctttcatcaaaatcccatccct
agagaagataaggttaacctaaagagaaatgttgagactgagtacaagaaatggagaagt
atggctaacgaggcagacattatcgcccatttcagcatgcaaggcactccaccgttattc
ctctgcatcatttggaagaaccttattgatgatagcagaattgctcccatagcctacaga
gtgcttgaaagaataggaccaagagctttgtccgctcatctacgcatgttttgtgacttc
attgtatacgagttctgtctcgctgggaaccagagttattttacacgatacatagaggcg
atcaacgacatggtgtggaaatgtaatattctcacaattgacagactggttctttgtttg
gctctacgaaacctggagaataatgaagctcagattgctttctacatcatttaccagatt
ctggtgcggtcatctgattttaagaaccgggtagccgacttcctgcgggaaaatacaccg
gaccattggttacagagcaattggcatgataagcacatgacgttccataagaattatcca
gagaagtttttctatgagggaatacaggatctgaatagcccaatacagcatcagtatctt
ccggtgtacttcggcaacatctgtttacggtttattccggtgcttgatattctcattcat
cgattgatagagatgtcttctgtacagaaattcctggagagcattctggacaatttgggc
gggctttataagttccatgatcgaccaattacatacctgtacaacacattgcattattac
gacaacaagttggctaacaggtcaggtcttaagagaaagcttgtgggtgccattatccga
gcacatcaggaaattcatccaaacaactggtgtctcacagaagattatcagaggtactta
cagatgtctgccgatactacaaactggataccagagcaagattactacatccgtttgatt
ggcaggctggttgaaactatagatggtcagtcaccatttcccagctgtgattggcgattt
aatgaattcccaaacccagcagctcatgcattacatgcgacatgtgttgaactaatggct
ctaccagttgccagtcagaatgtgggggtggctatcctagatgttgtcttgaaaagtgct
tcacaacttcctagagagaaactgatgggatggatgaatgcggtgggtctcgtacttact
gctttgcccgagacttactggaatgtcttaaatgaacgcatcattgagacgatgcagagt
tcacttctcacaaacctgggtcgcactttctttgagatgttcgacttcctcacatgtcag
agtatgtatgtagaatcaacatgcacttacgtcgtggctcttgcacacgcggtatggcat
catgcagggatcggtcaactgagtgttcttccccagtttgtcaaagaaaaaatcaaatgt
tgtattaagacagaggagcagtttctctttctattgtatctgataggaccgtttctgtcc
cggttccacatcgagagaacaagatgtctgttagatttaaccgttgaactgtatgagatc
ttagcaaacattgacaaatcatgcgaccatcttcatcacatggacattatcactgatttt
ctgtaccatattaagtacatgtttgtcggagatggcgtaaagaacgaggtggataaggtg
attcgaaacctgaggcccgctctgcagttacgtcttaagttcatttctcacaccaatgtt
gatgaaactccggttgctaccccacgggaaagcatttcctctgcaggactcgagtcaaaa
ggaaaatatttcggtgaatga
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