Ruditapes philippinarum (Manila clam): 132716684
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Entry
132716684 CDS
T09557
Name
(RefSeq) F-box/LRR-repeat protein 6-like
KO
K10272
F-box and leucine-rich repeat protein 6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132716684
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132716684
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_6
DUF4629
Motif
Other DBs
NCBI-GeneID:
132716684
NCBI-ProteinID:
XP_060555989
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MPKYPKGILGVRKDPKNQILFSFSARQGDEWPSDDDDDSDYRPGNGSDSDYEGTSTSKQS
QKRKIKHTKTKRSTKKKVKQDNDKCTDKRTRPNNTRDHDHPAFHGEVPSLPTEIWEKIFK
IIVQKDGALPFLERASKVCKLWKDISVQPHLWEKVDMSFGWMNLNETALRSICASRLGLC
KELNVSGCKFMNHPWGVQAITDNCHNLRAINLSNCKKLPTGSVDNIVSSCKLLQDIDLSS
TTVDAVSQQTSCNIAEKCGANLRKIVISENFAKNLSKFLTKLMEHCPNLEHLDMSNVKWQ
SGLLYDIELFQRKCPKLKRFFSSNNAGRVQATQQDSPGFPNLEELSLATIESNRIVTSDF
VQRFVKNATKLRLIDLRGCISDTVGVVTTLKDIEASNVEQLYLARSQVASCSVLDDILCK
WRHSLTHLDLSWNNFVRDTLDVALNQMCDYDGDLKIIQLNLAGTNVHMDILKKVLRKMTK
LEQLDLSSCRDLDRG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaatatccaaaaggtatcctaggcgtgaggaaggacccaaagaaccagattctg
ttttcatttagtgctagacaaggagacgaatggccttcagatgatgatgatgattcagat
tatagacctggaaatggctcagactcagactatgagggtacaagcacaagcaaacaatca
cagaaaagaaaaataaagcacacaaagacaaaaagaagcacaaagaagaaagtcaaacag
gacaatgataaatgtacagacaaaagaacaaggccaaacaacacgagagaccacgatcat
ccagctttccacggtgaagttccctcattaccaacagaaatttgggagaagatcttcaag
ataatagttcaaaaggacggagcattaccatttttagaaagggcttctaaagtatgcaag
ctatggaaagatataagtgtacagcctcatctatgggaaaaagtagacatgtcatttgga
tggatgaatttaaatgagacagctttgaggtcaatatgtgcaagcagacttggtctgtgt
aaagaactaaatgtgtccgggtgcaagtttatgaatcatccatggggcgtacaggccatc
acagacaactgtcacaacttacgtgcaataaatctatccaactgcaagaaattgccgaca
ggatcagttgataatatagtatcatcatgcaagcttctacaggatatagatctatcttca
accactgttgacgcagtttcccagcagacatcgtgcaatatagcggagaaatgtggggcc
aacttgagaaagatagttatatcggagaactttgctaaaaacctgagcaagttcctcaca
aagttgatggagcattgtccgaatctagagcatttagatatgtccaatgttaaatggcag
agtgggctgttgtatgatatagagttgttccagaggaaatgtccaaaactgaagagattt
ttctcttcaaacaatgcaggtcgagtgcaagccacacagcaagattcccctggtttccca
aacttggaagaactgagtttagccaccattgagagtaacagaatagttaccagtgatttt
gttcaaaggtttgttaagaatgctacaaagttaagacttatagatttacgtgggtgtata
agtgacacagtcggtgtggtgacgaccctgaaagatatagaggctagtaacgtagaacag
ttgtacctggcaagaagccaagtggcttcgtgctctgttctagatgatattttatgcaag
tggcgacacagccttacacatttagacttgtcttggaataatttcgtccgagacaccctc
gatgtggccctcaaccaaatgtgtgattatgatggtgatttgaagattatacaacttaat
ctggcagggacaaatgtccacatggacatactgaagaaagttctcaggaagatgacaaag
ttggagcaacttgatctaagttcatgtcgagatctcgatcgaggctga
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