Ruditapes philippinarum (Manila clam): 132716692
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Entry
132716692 CDS
T09557
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132716692
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132716692
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
Helicases
132716692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Helicase_C_2
Ca_bind_SSO6904
Motif
Other DBs
NCBI-GeneID:
132716692
NCBI-ProteinID:
XP_060555998
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MNFKTRKNDQFKGHKGKIFRKKLYSSKRNNRNIIDEEIEQLQEKLNAFEVSKSSLFTDFP
LSKKTLKGLWACNFEKPTDIQRESIGLALNGNDILGAAKTGSGKTLAFIIPVLECLYKLK
WSNYDGLGALIISPTRELAFQTFEVLKKLGKFHDFSAGLVIGGKPLKEEAGRINRTNIVV
CTPGRLLQHMDETTYFSADNLKILVLDEADRILDLGFAQTMNAIIENLPSERQTLLFSAT
QTRSVKDLARLSLQDPMYVSVHENATESTPAQLEQSYIVCELHDKLNLLWSFLKNHLKSK
ILVFLTSCKQVKYIHEAMRHLKPGIPIFALHGGMPQLRRVEVYNQFMWKQRVCLFATDIA
ARGLDFPAVNWVVQLDCPEDANTYIHRVGRTARYEKDGESLLVLLPSEEEFMIKQLTDKK
IPIEKIKVNQQRLYPIQSKLEANCAADPELKASAQRAFVTYLRSIFLMKNKKVFDVHALD
IEKYASSLGLAIAPNVRFLKKDQKRKEEKESKKIKKPVDLSKLNKLESSSEESDSGNSSE
SDDDDTDDDTDDDESENESKTGIKSVENSNSVSSNTSSLLKSGKITKSEMEVTSRNKLLG
KDVPTVENSESSESDDSDSDELVDNEDIDDSEFSDSSESGESSDDSDNESETGLKQEKTD
DNSGFRFDNDDDDDDELFKVKPNVDIDDILAKKGIDVEDVTEPEESKSQKRKKALKQNKE
LQALKLWRKNIKINTKVTFDEEGQVEVDPHKIPQVDVDIERPDDVGGIDIAKAREKMKAE
DEIDKQIYREKIKQRHREQRLKRKEENRAQKQRGVKQDEEEEEMEARLPSDDDDEKADPL
SFLPDPDKVYGSTQSDSDSDSDGPSSSKRAKLSNKSQKMGFNANVSNDESDDDEDDDDDD
SGDSDSGNVMDTELSLQDDEEIALRLLQGK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaagactagaaaaaatgaccaatttaaaggtcacaaaggcaagattttccgg
aagaaattgtatagctcgaagcgaaataatcggaacatcatcgatgaggaaatcgaacag
cttcaggaaaagttaaacgcgtttgaagtttcaaaaagtagcctattcactgactttcca
ttatcaaagaaaacattaaaaggattatgggcatgtaattttgagaaaccaacagacata
cagagagagtccataggtctggcattaaatggaaatgatattcttggtgcagcaaagaca
ggatcagggaaaacattggcttttattataccagttttagagtgcctatacaaactaaaa
tggtcaaactatgatggacttggtgctttaattatatcccctaccagagaacttgccttc
cagacatttgaagtgctgaaaaaacttggcaagtttcatgatttctcggctggtcttgtg
atcggaggcaagccgctgaaggaagaagctggccggataaatcgtacaaacattgttgta
tgtactcctggtagattgttacaacatatggatgaaactacctacttctcagcagataat
ctaaaaatacttgttttggatgaggcagacagaatactggatcttggttttgcacagact
atgaatgctataatagaaaacctcccttcagaaagacaaacattactgttttcagctaca
cagactaggtcggtgaaggatttagctcggctcagtttacaggatccgatgtatgtgtct
gtacatgagaatgccacagagagtacaccagcacagctagagcagagttatattgtgtgt
gagctacatgataaactgaatttgctgtggtcattcctgaagaatcatctcaaatcaaag
atattagtgtttcttaccagttgtaaacaggtaaaatatatacatgaagcaatgagacat
ttaaagccagggataccaatatttgccctacatggaggcatgccacagctgagacgcgtg
gaggtatataaccaatttatgtggaagcagagggtctgtctgtttgccactgatatagca
gctagaggacttgattttccagctgttaactgggttgtacagttagactgtccggaggat
gccaacacatacatacatcgtgtaggccgtactgccaggtatgagaaggatggggaatca
ttgcttgtgttgctgccttctgaggaggagtttatgattaaacaactaacagataaaaag
attcctatagagaaaatcaaggtgaatcaacaacggttataccctatacaatcaaaactg
gaggccaattgtgctgctgatccagaactcaaggcatcagctcaaagggcatttgtgaca
tatttacgatcaatattcttgatgaagaacaagaaagtatttgatgttcatgctctagac
attgaaaaatatgctagctcactagggttggctatcgcaccaaatgtaagattcttgaaa
aaagatcagaaaagaaaagaagaaaaagaatccaagaaaataaaaaagccagttgattta
tcaaaactgaataaactggaatctagtagtgaagaaagtgacagtggcaattctagtgaa
agcgatgatgatgatactgatgatgatactgatgatgatgaaagtgaaaatgaaagtaaa
actggtattaaaagtgtagaaaattcaaattcagtgtcatcaaacacttcatctctttta
aaatcagggaaaataacaaagtctgaaatggaagtaactagtagaaataaattgttagga
aaagatgtgccaacagtagaaaactcagaaagttctgaaagtgatgattcagacagtgat
gagttagtagataatgaagatatagatgacagtgaatttagtgatagttctgaaagtggg
gaatctagtgatgatagtgataatgaaagtgaaactggcttaaagcaggaaaaaacggat
gataattcaggatttcggtttgacaatgatgatgatgacgatgatgagttatttaaagtg
aagccaaatgtggatattgatgatatattagctaaaaaagggatagatgtagaggatgtg
acagaacctgaggagagtaagtcacagaagagaaagaaagctctcaaacagaacaaggaa
ctacaggcacttaaactgtggaggaaaaacatcaaaatcaataccaaggtcacctttgat
gaggagggacaggttgaagtagatcctcataagattcctcaagttgatgtggatatagaa
agacctgatgatgttggtggtatagatatagcaaaggcaagagagaaaatgaaagctgaa
gatgaaatagataaacagatttacagagagaaaataaaacagagacatagagagcaaaga
ttgaaaagaaaggaagaaaacagggctcaaaaacagagaggagtaaaacaagatgaagag
gaagaagaaatggaggcgagattaccatcagatgatgatgatgaaaaagctgatccgctt
tcatttttacctgacccagataaagtgtacggcagtacacaatcagacagtgactcggat
agtgacggtccttcatcgtcaaagagagcaaaattatccaataagtctcaaaagatggga
tttaatgcaaatgtcagtaatgatgaatcagatgatgatgaagatgatgacgatgatgat
tccggtgattctgactctggaaatgtgatggacactgaactttctctacaagatgatgaa
gaaatagcattgagactgttacaagggaagtaa
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