Ruditapes philippinarum (Manila clam): 132716752
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Entry
132716752 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit alpha-1-A-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132716752
04082 Neuroactive ligand signaling
132716752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132716752
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132716752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Motif
Other DBs
NCBI-GeneID:
132716752
NCBI-ProteinID:
XP_060556064
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MHYNMNVKCYSQVRCFVCFSMFICVVTSHSMNDSKKLLHDKMLTYEKTFRPVENQSEPLE
VFIGFELVSIQEFNEVKEKLSVATIIRAYWIDEYMAWDPADYGGLDQLVIESDNVWTPNL
ALVNTVEKLEKIGDAWQLIRFTPNGFAHYFPGDVLSAACQVDVTYYPWDRHKCSFSFAPW
AQSETEIIFSPFGDKVFTTYFSENGIWHFYNSSIEYTPGSVFIDFTLYLKRKPMFVLLNV
VLPIIFMAFLNTVVFAIPVESGERITYSITVLLALAVFLTFVGDNLPKTSSPMSLFGYYL
LIVLIISMGITLATIFNMRLYHKDENIPIPDWIVRFVMCLQCECSNVLNKRKCSSLECKK
ETMDTESEHRSKNENAEDSLNGRKTKLENKNDSKIIWRDVSSAFDKIFFVFCFITVSVAT
IWFFIKVSGNNGNDFHD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcattataacatgaatgtcaagtgttattctcaagtaaggtgttttgtgtgcttctct
atgtttatctgtgttgtaacatcccacagtatgaatgattcaaagaaattgcttcatgat
aaaatgcttacatacgagaagacttttagaccagtagagaaccagtccgagccactagag
gtatttattggttttgaacttgtttcaattcaagaattcaacgaggtaaaggaaaaactt
tcagtagctacaattataagagcttattggatagacgaatatatggcatgggatccggca
gattatggaggtcttgatcaattagtcattgaaagcgacaatgtttggacaccgaattta
gctttagtaaacactgttgaaaaactggagaagataggtgatgcttggcaactcattcgc
tttacaccgaacggatttgctcattattttcctggagacgttttatctgcggcatgtcaa
gttgatgttacttactatccctgggacagacataaatgtagtttttcttttgccccatgg
gcacagagtgaaaccgaaataatctttagtccgtttggagataaagtgtttacaacatac
ttttcagaaaatgggatatggcatttttacaattcaagcattgagtatactccagggagc
gtctttatagattttactctttatctcaaacggaaacctatgtttgttctcctaaatgtc
gttttgcctataatctttatggcctttttaaatacagtggtgttcgctattccagttgaa
agtggtgaacggattacttacagcatcacggttctcctggcacttgctgtttttcttacc
ttcgttggtgacaacctccccaaaacgtcaagtcctatgtctttgttcggatattaccta
ttgatagttcttatcataagcatgggtatcacacttgcaacaatattcaatatgcgctta
tatcacaaagatgaaaacatacctattcctgactggattgtacgctttgttatgtgctta
caatgtgaatgtagcaatgtactaaacaaacgaaagtgcagttcattagaatgcaaaaag
gaaacaatggacacagaaagcgaacatcgttcgaagaatgaaaatgccgaagatagttta
aatggaagaaaaacaaagttagaaaataaaaatgattcgaaaattatatggagggatgtc
agttctgcgttcgataagattttctttgtcttttgcttcattacagtatcggtggcaacc
atttggtttttcataaaagtttccggaaacaacggaaatgactttcatgattaa
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