Ruditapes philippinarum (Manila clam): 132716824
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Entry
132716824 CDS
T09557
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132716824
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
132716824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_5th
CILP_C
CILP
Ig_3
Ig_2
I-set
ig
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
132716824
NCBI-ProteinID:
XP_060556147
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MTKQILPYLTETPQTKYRLKGEDATLCCQAIANPPIDYYEWFKDGQILNESLNQEGNKLS
LTSLTTFDSGSYQCRANSAAGAIMSPVATMNIKEGSDEFCSDALQQKTIALPDDCIQSRT
NTATYEVGECIPKRCRGHNTTDNGSCREDITTCCTTGEADLEKVQCSGYELEVVVVKSCS
CGTCVSDSLTISGSAFGVKDGSPLRFGEVWLNGVFQTYTSTSGGFNIDVSKASPRITLNL
KDVYFKQFLPAVKVIDINDQMGGVLRIDIPMIKSSEPVQIDSSVDNTLAAGSSENNESTS
IIQILVPANAFYYSNGTQYSGTVDASLTFLDPTNSSVLENMPGTFEIVDEEGQLADLDSL
GVFSLYFEDSSGEPLVLNKVVDFYVPLEAVQDEDILGEIKLWMINTETGVWEYVTQETGS
TRRRRQINTARWIGELDLSTISQAWFNYDRIRRRSTACFFKVRLFVDATTLATVTYTRKY
INVHTHILNGNLLTTVKSYMRYPESECMTGICEGNNAFISLFYYGRKGTDHLFAGTPALE
QSSHYYQIIDEEKVLNIQMSVSEDGPFFRNEAQCKASSKDEKHLKFHYGQTNEIFTYMKF
FELPGPGSNIDFLIRNSQRTWYPARVPEGYRICLMKVRIMFQSTIYLSPGQFIKLKATSY
GGTYSETENFIFGIREYALSNLVDTTFCIEYKCSGTIDPVFDEQFDYTRVALHLIYPESG
ITSEITTEADFVSSFTDLGNVAQLGEVDGRYDMKAPTVYTPEIGLYSATSDRLDIDSATN
TAEGECRSGIPHNLDDDNPDIGVAVTFTLTGENNCNNWWFFLGSFSCFG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaaattttgccttacttaacggaaacgccacaaacaaaatacagattaaag
ggtgaagatgctacgctatgttgtcaagctatagcaaatccacctatcgattattacgag
tggtttaaagatggtcaaattcttaacgagagcttaaatcaagagggtaataaattaagt
ttgacaagcttaacaacatttgatagcggcagttaccaatgtagagctaacagtgctgct
ggagctataatgtctcctgtagcaacaatgaacataaaagaggggtctgacgagttttgt
tccgatgccctccagcagaaaacaatcgctttacctgatgattgtatccaatccagaaca
aacactgcaacatatgaagtaggggaatgcataccaaagcgttgtaggggccacaatacc
accgacaatgggtcatgccgtgaggacatcacaacatgctgtacaacaggcgaagctgac
cttgaaaaagttcaatgttcaggctatgaacttgaggttgttgttgtaaaatcgtgtagt
tgtggcacatgtgtatcagattctcttacaatttcgggatcagcttttggcgtgaaagat
ggatcccctcttagatttggcgaagtttggttaaatggtgtttttcaaacctacacaagt
acatcaggtgggttcaatattgatgtttccaaagcttctccaaggataacattaaactta
aaagatgtttatttcaagcagtttctaccggccgtgaaggtaatcgacatcaatgatcaa
atgggtggagtgcttcgaatagacattcccatgattaaatcatcagaaccagtgcaaatt
gattcatcagttgacaacactttggctgcaggttcttctgaaaataacgaaagcacgtca
attattcaaattttggttccagctaacgcattttactattcaaatggcacacagtatagt
ggaacagttgatgcaagtctaacttttcttgatccaaccaattcatctgtactagaaaac
atgccaggaacatttgaaattgttgacgaagaagggcaacttgctgatctagattctctt
ggtgtcttcagcctttactttgaagattcatctggagaacctttggttttaaataaagta
gtcgatttttacgttcctcttgaagcagttcaagacgaagacattctaggggaaataaaa
ttatggatgattaacactgaaactggagtttgggagtatgtaacgcaagaaactggatca
accagaagaagaaggcaaataaatactgctcgttggattggagaactcgacttgtctacc
atatctcaagcctggttcaattatgataggataagaagaagatcgaccgcctgtttcttc
aaagtaagacttttcgttgacgcgacaaccttagcgactgttacatatacgaggaaatat
attaacgtacacacccatattcttaatggtaatttattaacaactgtaaaaagttacatg
cgctaccctgaaagcgaatgcatgacaggaatttgcgaaggaaataatgcgtttatatct
cttttctactacggacgaaaaggtaccgatcatctctttgctgggactcccgcattagaa
caatctagccactattatcaaataatagatgaagaaaaggttttaaacattcaaatgtct
gtatcggaagatggaccattttttagaaacgaagctcaatgcaaagcctcaagcaaagac
gaaaaacacttaaagtttcattacggacagacaaatgaaatatttacctacatgaaattt
tttgagttgccaggtccaggatcaaatatagatttccttattcgtaacagtcaaagaacc
tggtatcctgctcgagttccagagggttacagaatctgtttaatgaaagttcgaattatg
tttcaatcaaccatatatttgtctcccggtcaatttatcaaattaaaagcaacaagttat
ggtggcacatacagtgaaaccgaaaattttatttttggtatccgagagtacgcactttca
aatttagtagacacgacattttgcattgaatataaatgcagtggaacaattgatcctgtg
tttgatgagcaatttgattatacaagagttgctttgcatcttatctatcctgaaagcggt
attactagtgaaataacaactgaagccgattttgtgtcatcctttactgacctgggcaat
gtcgcccaacttggggaagtcgatggtcgatacgatatgaaagcacctacagtatacaca
cctgaaattggcttatactcagcaacatccgatcgattagatatcgatagcgccacaaac
acagctgaaggggagtgtcgctcgggtataccccataatcttgatgacgacaatccggat
atcggtgtcgctgtaacattcactttaacaggagaaaacaactgtaataattggtggttt
tttttggggagtttttcctgctttggttga
DBGET
integrated database retrieval system
