Ruditapes philippinarum (Manila clam): 132716865
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Entry
132716865 CDS
T09557
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
rphi
Ruditapes philippinarum (Manila clam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
RsmF_methylt_CI
LRR_5
LRR_EndoS
LRR_NXF1-5
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
132716865
NCBI-ProteinID:
XP_060556179
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MHSDADMNESVYFKEEDLSSRELTAFPLDVLQNKHIESLLLDYNDIKELPPEIGMCIQSL
KCFSALGNSLTSIPESFGNLGQLEEVYLNENELVKLPDSLCRLKHLKVLKLTGNQLKVLP
EEFGELTALEKLSCDENILFRLPKTFGCLENLRILELSCNSIEKLSEGFGMLRSLEVLNL
CSNKLTSLPESFGNLPNLKTVDISVNEIKFLPSHFNSSLTLQKIYIDSNLLQTLPDWVSN
LENIVEFSVKDNQFQNQTLSDSFPKVCKKLKHLDLSGNFMSYLPSTIGELEKLEFLHLGS
VIGELERRNFQNGNWLAEIPNSICCLTNLKQLHLDENQLNELPRDFGSLISLEILDLGQN
LLHELPESFGNLKCLRVCMLSKNHLMWLPSNFGDLSELEDLRLDDNELAELPESFYKLSK
LKTLDLFSNRLIEIPVALHQLKNLVRLDLDCNDFKVPLSQIPQIITQSKYPERDPNLKDN
WRGRARKDITNLDKDIIKAPNYGPLEDFEPPPPGLNLSEDCLIMAMKKNMSIWKSHSDTS
NAQRKPYRPKQRMRIHYDSGSEDDNEDNEKLVHNLDIDNECEGSYEDSGTDYDNPDDDED
DDDDNFEPPIYIQPTEWSGLKQSVPDKGTQENVQAMLEDTECWDDEVNENAKQFDETPVY
VHPTKLYYTPIDCGKFTFAPFDIHEESYVKRPERYPVEDGQFENCDIDDTEDINVDPVF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgatgcagatatgaatgagagtgtttactttaaagaagaagatctatcttca
agggaacttactgcgtttcctctagatgtcttgcagaacaaacatatagaaagtttattg
ttggattacaatgatataaaagaactaccccctgagattggcatgtgtattcaatcactt
aaatgcttttctgcattaggaaatagcctgacaagtatacctgaatcatttggaaacttg
ggacaattggaagaagtttatctgaatgaaaatgaacttgtgaaattgccagattctcta
tgtagattaaagcatctaaaggttcttaaattgactggcaatcagcttaaagttctacca
gaagagtttggtgaattgactgcactggagaaactctcttgtgatgaaaacattttattt
aggctccccaaaacatttggatgccttgaaaatttgagaatattagagttgagttgtaac
agcattgagaaactatctgaaggatttgggatgcttcgatctcttgaagttctaaatctt
tgtagtaacaaacttacctcactacctgaaagttttggaaatttgccaaatctaaaaact
gttgatatttctgtaaatgaaatcaagttcttgccatctcattttaactcaagtctgacg
ttacagaaaatatacattgacagtaatctgctacaaacattgccagactgggtctcaaac
cttgaaaatattgttgaattttctgtcaaagacaatcagtttcaaaatcagacattgtca
gacagctttcctaaagtttgtaaaaagttaaaacatcttgacttaagtggaaatttcatg
tcctatttaccaagcacaattggtgaattagaaaaacttgaatttcttcatcttggaagt
gtgattggtgagctggagaggaggaattttcagaatggtaactggctggcagaaatacca
aatagtatttgctgtttaacaaacttgaaacaacttcacttagatgagaaccagctgaat
gagctacctcgggacttcgggtcactgatttcattagaaattctggatctaggtcagaat
ttgctccatgagttgcccgaatcatttgggaatttgaaatgtttaagagtatgtatgtta
tcaaagaatcatctgatgtggcttcccagtaattttggtgacctatctgaactagaagat
ctaagattggatgataatgagcttgcagagttgccagagtcgttctataagctgagtaaa
ttaaagacgttagatttgttcagtaacagattgatagagatacctgttgccctacaccaa
cttaaaaatctggtgagacttgatctagattgtaatgactttaaagtaccattaagtcaa
atacctcagattattacccagtccaaatatccagagagagaccctaacttgaaggacaat
tggagaggtcgagcaagaaaggacattactaatctggataaagatatcattaaggctcca
aactatggtcctttagaagactttgaacctcctccacctggtctcaatctaagtgaagac
tgccttataatggcgatgaaaaagaatatgtcaatatggaaaagtcattctgatacaagc
aacgcacaacgtaaaccctacaggccgaaacagagaatgagaattcattatgactccggg
tcggaagatgataatgaggataatgaaaagttagtacacaaccttgacattgataatgaa
tgtgaagggagttacgaggatagtgggacagactatgataatcctgatgatgacgaggat
gatgatgatgataattttgagcctcctatatatatacaacctacagaatggagtgggtta
aagcagtctgtaccagataaaggaacacaagaaaatgtacaagcaatgttggaggacaca
gagtgctgggatgatgaagttaatgaaaatgccaaacaatttgatgaaactcctgtgtat
gttcatccaacaaagctatactacacaccaatagattgtggtaaatttacatttgcacca
tttgatattcatgaagagagttatgtcaagagaccagaaagatatcctgttgaagatggt
cagtttgagaactgtgatatagatgatacagaagatataaatgttgatccagttttctga
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