Ruditapes philippinarum (Manila clam): 132717075 Help Entry 132717075         CDS       T09557                                  Name (RefSeq) toll-like receptor 4   KO K18808   toll-like receptor 13 Organism rphi  Ruditapes philippinarum (Manila clam) Brite KEGG Orthology (KO) [BR:rphi00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:rphi04054]     132717075 Pattern recognition receptors [BR:rphi04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    132717075 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 TIR_2 TIR LRR_4 LRR_NXF1-5 LRRNT CUB_M02D8_5_6th ThsB_TIR Motif Other DBs NCBI-GeneID:  132717075 NCBI-ProteinID:  XP_060556455 LinkDB All DBs Position Unknown AA seq 944 aa AA seqDB search MLMYTNIIFLMISTTTCVVQYTDDLNEMFQNVNDIFSVYRGQSFEKPTTAEECHDIPQCH CIDPGSGQGLLVDCKRQNLTEIPSKLPLNTTQLILSMNSISSIPANIFKNYVNMTFLDLS YNKITQLGKDSFNGLENLKILNLEMNQVRYTNITIHYKTFQPLIHLSAINLQQDLSEISN KERYPKEALAHLINLKQLAIDVMPTNAFHKQSEGMSISTLNYQSLKLEYLQLGGINRRCN IPEIFQGMFKNLPDLRNLTIQDCKLKSVQNKSFTELPKLESLDLSNNEELQFKSLANISY GLQFTNIKTLILRKIHATFGDCTKLTAHNLRYIYNLSLKYIFLDSNRLALFERDAVKFIP RSLIGLSLNDNKLMLGKYVIQIAINIAFNDFFANLKVFLIASQRVNHSFKELFSHMSMQE ILTMLGDHQKHKRSLNSDKRSSVANVKYDTRNFELFGPRDVLETSPNTYHTGIKFLSRLL LRFFGSRCQSCTNISPLILPLPLPMNLTVADLSHLGIKTIIKPLCFCENKLQNLSLNGNT FWYWKGPLMGLNELTHLNLAWDYCQKISLDFFHHFPKLRLLNVSGNYLGFPLSSDNDGTI FSKLSKLEILHMSSNKIQFMPTIIFKGLELLQELYLDSNQINIVNWNMDHMTELKFIDLS DNQIVKIDGNVRHQWNNLASQHALYINLANNSFICNCMYIDQINWFSDTNVCFINPRGYK CKFNNNTSGNLISADVISRSLTKDCANYMTLILSTSLALLATIILTVSGIAYRYRWNLRY MYYSAKFKLKGYSPGNTEEDEFEHDVFISYADGDGTFVRRNLVPELENNRGLNLLVHDRD FQAGNYVNDNIMKAITTSRKTLIIMSRHFLQSKWCCYEMNMARMEGIQTGREVICILMKE EVPTSGLPLEIIDIIRNKTYIECPAENPNHLQQFWDRLADAIIN NT seq 2835 nt NT seq  +upstreamnt  +downstreamnt atgttgatgtatacaaacattattttccttatgataagtacgacaacatgtgttgtgcaa tacacagatgatttaaatgaaatgtttcaaaatgtcaacgacatattcagcgtttaccga ggacagtcgtttgagaaacctactacagccgaagaatgtcatgatatcccacaatgccat tgtattgacccaggctcagggcaagggttactcgttgactgtaagagacagaatctgacc gaaattccatccaaactaccactcaacacaacgcaacttatactgtcaatgaattctatt tcttcaataccagcaaatatattcaaaaactatgttaacatgacatttttagacttatcc tacaacaagataacgcagctcggaaaagatagcttcaacggattagaaaacctcaaaatt ttaaaccttgaaatgaatcaggtcagatacacaaatataacaatccattataaaacattt caaccgttgattcatttatctgccattaacttacagcaagatttatccgaaatttccaat aaagaacggtatccgaaagaagctttagcacacttaatcaacttaaaacaacttgccata gatgtaatgccaacaaacgcatttcataaacaatctgaaggaatgtcaatttccacatta aattatcaatctctcaaacttgagtatttacaactaggtggaatcaaccgaagatgtaat attcctgaaatcttccagggtatgttcaaaaatctgcctgacctccgaaatctgacgatt caagactgcaaattgaagtctgttcaaaacaaaagtttcactgaattaccaaaacttgaa agccttgatctttcaaacaatgaagaacttcagttcaaaagtctggcaaatatatcatat gggttacaattcacaaacattaaaacactaattttaagaaaaattcatgcaacatttggg gattgtacgaaacttacagctcataacttgagatatatatacaacttgtctttgaagtac atattcttagactcaaacagactggctttatttgaaagggatgctgtcaaattcatccct cgtagtttaatcggcttatctctaaatgacaacaaactaatgctcggaaaatatgtcatt caaatagccataaatatagcatttaatgacttctttgctaatctaaaagtatttcttatt gcttcgcaaagagtaaatcatagtttcaaagaactgtttagccatatgtcaatgcaagag atacttacgatgctaggagatcatcaaaaacacaaacgatctcttaattcagacaaacga tcatcagtagcaaatgtgaaatatgatacaagaaactttgaactctttggtccaagagat gtccttgaaacaagtccaaatacgtatcacacaggcataaaatttctttcaagacttcta ctgagattctttggaagtaggtgccaaagttgcacaaatatttcaccattgattttacca ttacccctaccaatgaatctaacagttgccgatctaagccacttgggcataaaaactata atcaaacccctttgcttctgtgaaaacaaactacaaaatctgtccctaaatggaaacacc ttttggtactggaaaggacctctaatggggttaaatgaattgacacatttaaatttggca tgggactactgtcaaaaaatatctctcgacttttttcatcatttcccaaaactcaggctt ttaaatgtatcaggaaactatcttggatttccacttagttctgataacgacggaacaata ttcagcaaactttcaaaacttgagattcttcatatgtcctcaaataaaattcagttcatg ccaacaattattttcaagggactggaactacttcaggagttgtaccttgattctaatcaa ataaacatcgtcaactggaatatggatcacatgacggagttaaaattcatcgatttaagt gacaatcagatagtaaagattgatggaaatgttcgtcatcaatggaataatctcgcctca caacatgccctgtacatcaacctggcaaacaactctttcatttgcaactgtatgtatata gatcaaataaactggttttcagacacaaatgtatgttttattaacccccgtgggtacaaa tgtaagttcaacaacaataccagtggtaacttaatcagtgctgatgtcataagccgatct cttactaaggattgtgctaactatatgacacttattctatcaacatctttggcactgctc gcaacaataattttaacagtttcagggatagcttatcggtaccgatggaatctgcgttat atgtactactctgccaaattcaaattaaaaggttatagtcccggaaatacagaagaggac gaatttgaacatgatgtgtttatatcttatgcagatggtgacggaacttttgtgcgtcgt aatctagttcctgaacttgaaaataatcgaggattaaatctgcttgtacatgatagagac tttcaagctggaaactacgtgaatgataatatcatgaaggctataacgacgtcccgtaaa acacttatcatcatgtcacgacattttcttcaaagcaagtggtgttgttacgaaatgaac atggcaagaatggaagggattcagacaggacgtgaagtgatatgtatcttaatgaaggaa gaagttccaacttctggtctgcctctggaaatcattgacatcataaggaacaaaacatac atagaatgtcccgcagaaaatccgaatcatctacaacagttttgggaccggctcgctgat gccataataaattaa

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